Bordetella trematum: SAMEA390648702576
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Entry
SAMEA390648702576 CDS
T04322
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
btrm
Bordetella trematum
Pathway
btrm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SAMEA390648702576 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btrm03019
]
SAMEA390648702576 (rnc)
03009 Ribosome biogenesis [BR:
btrm03009
]
SAMEA390648702576 (rnc)
03036 Chromosome and associated proteins [BR:
btrm03036
]
SAMEA390648702576 (rnc)
Enzymes [BR:
btrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SAMEA390648702576 (rnc)
Messenger RNA biogenesis [BR:
btrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA390648702576 (rnc)
Ribosome biogenesis [BR:
btrm03009
]
Eukaryotic type
90S particles
RNase
SAMEA390648702576 (rnc)
Prokaryotic type
rRNA processing factors
SAMEA390648702576 (rnc)
Chromosome and associated proteins [BR:
btrm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SAMEA390648702576 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
SAI71000
UniProt:
A0A157NC44
LinkDB
All DBs
Position
1:2709595..2710350
Genome browser
AA seq
251 aa
AA seq
DB search
MSLAKLETRLGHQFHDQALLEQALTHRSHGAHHNERLEFLGDSVLNFVVAAMLYERYPEL
DEGDLSRVRANLVKQASLADIAQRLDLSPVLRLGEGELKSGGFRRPSILADAVEALFGGV
FLDAGFAAARHVIERQYEPVLASVDLQTLGKDAKTLLQEFLQGRKMALPVYTVVATHGAA
HSQQFEVECAIPALEIKVTAAGASRRAAEQSAAKLVLEAVQAVNPRVARKPARGRKTAQL
SLPVAVAQEVK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtccctagccaagctggaaacccgcctgggtcatcaattccatgaccaggccctgctc
gaacaggcgctgacgcatcgcagtcatggcgcccaccacaacgagcgcttggagttcctg
ggggactcggtgctgaatttcgtcgtggccgccatgctttacgagcgttatccggagctg
gatgaaggagatctgtcgcgggtgcgcgccaatctcgtgaaacaggcgtcgttggcggat
atcgctcagcgcctggatctctcgccggtgcttcgcctgggcgagggggagctcaaaagc
ggcggttttcgccgcccgtcgatcctggccgatgccgttgaagcgctgtttggcggtgtc
tttctcgatgccggctttgcggctgcgcgtcacgtcatcgaacgccagtacgagccggtg
ctggccagcgtcgacctgcaaacgctgggcaaggacgccaagaccctgttgcaggagttc
ctgcagggacgcaagatggcgttgcccgtctatacggtggtcgccacccatggcgcggcc
catagccagcagttcgaagtcgagtgcgccatcccggcgctcgaaatcaaggtgacggct
gccggcgcaagccgccgcgccgccgagcaatccgccgccaagctggtgctggaggcggtg
caggccgtcaacccccgcgtggcacgcaaacccgcccgcggacgcaagaccgcacaactg
tcgctgcctgtggcagtggctcaagaggtgaaatga
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integrated database retrieval system
