Bordetella trematum: SAMEA390648702756
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Entry
SAMEA390648702756 CDS
T04322
Symbol
mutU
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
btrm
Bordetella trematum
Pathway
btrm03420
Nucleotide excision repair
btrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA390648702756 (mutU)
03430 Mismatch repair
SAMEA390648702756 (mutU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648702756 (mutU)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA390648702756 (mutU)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA390648702756 (mutU)
MMR (mismatch excision repair)
Other MMR factors
SAMEA390648702756 (mutU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SAI71392
UniProt:
A0A157RYI1
LinkDB
All DBs
Position
1:2918232..2920532
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AA seq
766 aa
AA seq
DB search
MMLDKLNPEQRAAVTLEPLHALVLAGAGSGKTRVLTTRMAWLIQTSQASPFGILAVTFTN
KAAREMMTRMAATLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPQTFQILDTADQLAAIK
RLLKAQGIDDEKYPPRDVQRFIAGAKEEGQRPDQVEAWDAHRRKLIEIYRLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLKLLAGGGAAIFA
VGDDDQSIYAFRGANIGNMADFERDYAQGRVIRLEQNYRSFGHILDAANALIGHNQGRLG
KNLWTDQGEGEPIRVTEQPSDGMEAQWIVDEIRALIREGRPRNEIAVLYRSNAQSRVLEH
ALFSAGIPYKVYGGLRFFERQEIKHALAYLRLIANPNDDTSFLRVVNFPTRGIGARTLEN
LADAAAGDGGSLFGAVARVPGKGGANLAQFATLIGRLAAETRELPLPEMVEHIIEESGLK
AHYQAEREGAERLENLHELVTAAAVFAAEEGAEGLPAGVVPQGGADDALMPGVVDAPVAE
TAGMTPLAAFLSHAALEAGDNQAQAGQEAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SILEPAGLEEERRLMYVAVTRARERLYLTLAQSRMLHGQTRYAMRSRFLEEIPDSHLKWL
TPRAGAAAASGWSGNAGSAWAGRGDAFGRRQTGAATPRAPRAGSTSGVTVGEIQYRVGQG
VSHARFGEGTIIGLSGNGQDAQAQIQFRDVGTKTLALGIAKLDILA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggacaagctcaacccggaacaacgcgccgccgtcaccctcgaaccgctacat
gccctggtcctggccggggcgggtagcggcaagacacgggttctcacgacccgcatggcc
tggctgattcaaaccagccaggccagtccttttggcattctggccgttaccttcaccaac
aaggcagcccgcgagatgatgactcgcatggcggccacgttgccgatcgacacgcgcggc
atgtggatcgggacctttcacggcctgtgcaaccgcatgttgcgcgcgcatcatcgtgat
gccggcttgccgcagaccttccagattctcgatacggccgaccagctggctgctatcaag
cgcctgctcaaggctcagggcatcgacgacgagaagtatccgccgcgcgacgtgcagcgc
ttcatcgcaggtgccaaggaagaaggccagcgtccggaccaggtcgaggcctgggatgcc
catcgccgcaagctgatcgaaatctaccggctctacgaagcccagtgccagcgtgagggc
gtggtggattttgccgagctgctgctgcgcgcctatgaattgctgagccgcaacgcgccc
gtgcgcgagcactatcagcgccgcttccggcacatcctggttgacgagttccaggatacc
aataccctgcaatacaagtggctcaagctgctggcaggcggcggggcagcgattttcgcc
gtgggcgacgacgaccagtccatctatgcctttcgcggcgccaatatcggcaacatggcc
gatttcgagcgcgactacgctcaagggcgtgtcatccggctggagcagaactaccgctcc
ttcggccacatcctggacgcggccaacgcgctcatcggccacaaccagggccgtctgggc
aagaatctctggaccgaccagggcgagggcgagccgatccgcgtgaccgagcagccttcc
gacggcatggaggcgcaatggatcgtcgatgaaatccgtgcccttatccgcgaaggccgc
ccgcgcaatgaaatcgccgtactgtatcgcagcaacgcgcaatcgcgcgtgctggagcac
gcgctgttttccgcgggcatcccttacaaggtctacggcggcctgcgctttttcgagcgc
caggagatcaagcacgccctggcctatctgcgtctgatcgccaaccccaacgatgacacc
tccttcctgcgggtggtgaacttcccgacccgggggatcggcgcgcgcacgctggaaaat
ctggccgatgctgccgccggcgatggcggcagcctgttcggcgcggtggcccgggtgccc
ggcaagggcggtgccaatctggcccagttcgccacgctgatcggccgcctggcggccgag
acgcgcgagttgcccttgcccgagatggtcgaacacatcatcgaggaaagcggcctgaag
gcccactaccaggccgagcgcgagggtgccgagcggctcgagaacctgcacgaactcgtc
acggcggcagcggtgtttgccgccgaagagggggccgagggcctgccggccggcgtcgtg
ccgcaaggcggggctgacgacgcgctgatgccgggcgtggtcgatgcgccggtcgccgag
accgccggcatgacgcctctggctgcgtttctgtcgcatgccgccctggaggcgggcgac
aatcaggcgcaggccggccaggaagcggtgcagctcatgaccgtccatgccgccaagggg
ctggagttcgacgccgtcttcatcaccggtcttgaagaggggcttttcccgcacgagaac
agcatcctcgaaccggccgggctcgaagaagagcgccgcctgatgtatgtcgccgtgacc
cgggcgcgcgagcgtctgtacctgaccttggcgcaaagccggatgctgcacgggcagacg
cgctacgccatgcgctcgcgctttctcgaagagatcccggacagccacctcaagtggctg
accccgcgcgccggggcagcggccgcttcggggtggagcggcaatgcgggttcggcctgg
gcaggcaggggcgacgccttcgggcgccgccagaccggcgcggcaacgccgcgtgcgccg
cgtgccggttccaccagtggagtgacggtcggcgagatccagtaccgggtcgggcagggc
gtgagccatgcgcgcttcggtgagggcaccatcatcgggctgagcggcaatgggcaggat
gcccaggcgcagatccagttccgcgacgtcggcaccaagacgctggcgctgggtatcgcc
aagctcgacatcctggcctga
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