Bordetella trematum: SAMEA390648702936
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Entry
SAMEA390648702936 CDS
T04322
Symbol
ldcC
Name
(GenBank) orn/arg/lys decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
btrm
Bordetella trematum
Pathway
btrm00330
Arginine and proline metabolism
btrm01100
Metabolic pathways
btrm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SAMEA390648702936 (ldcC)
Enzymes [BR:
btrm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
SAMEA390648702936 (ldcC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
SAI71846
UniProt:
A0A157SPN9
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All DBs
Position
1:complement(3123907..3126168)
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AA seq
753 aa
AA seq
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MKFHFPIVIIDEDFRSENTSGLGIRALAEAIRAEGFDVLGATSYHDLSQFAQQQSRASTF
ILSIDDEEFTADGDSAPALQNIRSFIQEVRRRNAEVPIYVYGETKTARHLPNDILRQLHG
VLHMFEDTPEFVARHLIREARSYLAGIRPPFLKALLDYAEDGSYSWHCPGHSGGVAFLKS
PVGQVFHQFFGENMLRADVCNAVEELGQLLDHSGAIGASERNAARIFNADHCFFVTNGTS
TSNKIVWQHAVAPGDVVVVDRNCHKSILHSIVLTGAIPVFLRPTRNHLGLIGPIPREAFS
PQAIKELIRAHPLLSDVDAETLRPRLLVLTQSTYDGILYDTEAIKSALDGYVQALHFDEA
WIPHAAFHPFYGAYHAIGGRRRRPRESLVYSTQSTHKLLAGLSQASHILVQDSATRQLDR
HLFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGRTLVEESIAEALDFRRAMREVAEPL
AEGDWWFQVWGPPTLPDEGIGDPSGWVLDHGETAPWHGFGPLEAGFNMLDPIKATIVTPG
LDMDGRFGEQGIPASIVTKFLAEHGVIIEKTGLYSFFIMFTIGITKGRWNSLVTALQQFK
DDYRRNTPMWRVLPDFCRKHPCYEEMGLRDLCQHVHTLYARHDIARLTTDMYLTQAEVAM
APGQAYACIANGRTQRVPIDQLEGRITTSLITPYPPGIPLLIPGEVFTRSIVDYLRFSRE
LNRDAPGFGTDIHGFVTLRDAQGQATHYVDCVA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcattttcctatcgtcatcatcgatgaggatttccgctccgagaacacttcc
ggcctgggcatccgagctctcgctgaagcgatccgggctgaaggctttgacgtcctgggc
gccaccagctaccacgacctgagccagttcgcccaacagcaaagccgggccagcaccttc
atcctgtcgatcgacgacgaggaattcaccgccgacggcgacagcgcccctgccctgcag
aacatacgcagcttcatccaggaagtgcgccgccgcaatgccgaggtgccgatctacgtc
tatggcgaaaccaagaccgcgcggcatctgcccaacgacatcctgcgccagctgcacggc
gtgctgcatatgttcgaggacaccccggagttcgtggcgcgccacctgatccgcgaagcg
cgcagctatctggccggcatccgcccgccgtttctcaaagccctgctcgattatgccgag
gacggctcctattcctggcattgccccggccattcgggcggggtggccttcctgaaaagc
ccggtgggccaggtcttccatcagttcttcggcgagaacatgctgcgcgccgacgtctgc
aacgcggtggaggagctcgggcaattgctggaccacagcggcgccatcggcgccagcgaa
cgcaatgccgcgcgcatcttcaatgccgaccactgctttttcgtgaccaacggcaccagc
accagcaacaagatcgtgtggcagcacgccgtcgcgcccggcgatgtcgtggtggtcgac
cgcaactgccacaaatctatcctgcacagcatcgtgctgaccggcgccattccggtgttc
ctgcgtcccacacgcaaccatctcggcctgatcgggccgatcccgcgtgaagccttctcg
ccgcaagccatcaaggagttgatccgggcccacccgctgctgtccgatgtcgacgccgag
acgctgcgccccaggctgctggtgctgacccagtcgacctatgacggcattctctatgac
acggaagccatcaagtcagcactggacggctatgtgcaagcgctgcacttcgacgaagcc
tggattccgcacgctgccttccaccccttctatggcgcttatcatgccatcggcggacgg
cggcggcgcccgcgtgaatcgctggtctactcgacccagtcgacccacaagctgctggcc
ggcctgagccaggccagccacattctggtgcaggactccgccacccgccagctcgaccgt
catctgttcaacgaagcctatctgatgcacacgtccacctcaccgcaatacgccatcatc
gccagttgcgatgtcgcggcggcgatgatggagccgcccggcggaagaaccctggtcgag
gagagcattgctgaagcgctcgatttccgccgcgccatgcgcgaagtggccgagccgctg
gccgagggcgattggtggttccaggtatgggggccgccgaccctgcccgacgaaggcatc
ggcgatccctccggctgggtgctcgatcatggcgagacggccccctggcacggtttcggg
ccgctggaagctggattcaacatgctggatccgatcaaggccaccatcgtcactcctggg
ctggacatggacggccgcttcggggagcaaggcatcccggcctcgatcgtgaccaagttc
ctggccgagcacggcgtcatcatcgagaagaccggcctctacagcttcttcatcatgttc
accatcggcatcaccaagggccgctggaactcattggtgacggcgctgcagcaattcaag
gacgactatcgccgcaacacgccgatgtggcgcgtgctgcccgacttctgccgcaaacac
ccttgctacgaggaaatgggcctgcgcgatctgtgccagcacgtgcacacgctttatgcc
cgccacgatatcgcccggctgacgaccgacatgtatctcacccaggccgaagtcgccatg
gcgccggggcaggcttacgcctgcatcgccaacggacgcacccagcgcgtacccatcgac
cagctggaaggccgcatcacaaccagcctcatcacgccctacccgccgggcattcccctg
ctgatcccgggcgaggtattcacccgcagcatcgtggactatctgcggttctcgcgtgag
ttgaaccgcgatgcgccgggcttcggcaccgacatccacggcttcgtcaccctgcgcgac
gcccagggccaggcaacacactacgtcgattgcgtcgcctga
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