Bordetella trematum: SAMEA390648702939
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Entry
SAMEA390648702939 CDS
T04322
Symbol
glyA_2
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
btrm
Bordetella trematum
Pathway
btrm00260
Glycine, serine and threonine metabolism
btrm00460
Cyanoamino acid metabolism
btrm00630
Glyoxylate and dicarboxylate metabolism
btrm00670
One carbon pool by folate
btrm00680
Methane metabolism
btrm01100
Metabolic pathways
btrm01110
Biosynthesis of secondary metabolites
btrm01120
Microbial metabolism in diverse environments
btrm01200
Carbon metabolism
btrm01230
Biosynthesis of amino acids
btrm01240
Biosynthesis of cofactors
btrm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMEA390648702939 (glyA_2)
09102 Energy metabolism
00680 Methane metabolism
SAMEA390648702939 (glyA_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMEA390648702939 (glyA_2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAMEA390648702939 (glyA_2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAMEA390648702939 (glyA_2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAMEA390648702939 (glyA_2)
Enzymes [BR:
btrm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAMEA390648702939 (glyA_2)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
SAI71851
UniProt:
A0A157LT41
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All DBs
Position
1:3128206..3129480
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AA seq
424 aa
AA seq
DB search
MYDATVSLADADPQLAAALRAEAQRQEDHVELIASENYASPQVMAVQDSVFTNKYAEGYP
GRRYYSGCEHVDVAEQLAIERARELFDCDYANVQPHAGAQANMAVFLALTEPGDTVMGMN
LAQGGHLTHGNPANFSGRLYRIIPYGLDPASGHIDYDEMERIALQARPKLLIGGFSAYSR
YKDWARMRQIADKAGALFWVDMAHVAGLVAAGEYPDPLPHAHVVTTTTHKTLRGPRGGLI
LAKGQDEAFYKKLDSAVFPGVQGGPLMHQIAAKAIAFREALQPEFKTYQRQVVTNARAMA
AVIQQRGYRIVSGGTDNHLMLIDLSAQPYTGKEADAALADAYITANKNSVPNDPRSPFVT
SGLRIGTPAVTTRGFGVSECEQLAGWLCDVLDALGSADAQRQGAVRDQVREQVVALCRRH
PVYG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgccactgtttccctcgcggatgccgatccgcaattggctgcggcgttgcgc
gcagaagcgcaacgtcaggaagatcacgtcgagctgatcgcctccgaaaactacgccagc
ccccaggtcatggcggtgcaggactcggtctttaccaataagtatgccgagggctatcca
ggccggcgttattacagtggttgcgagcacgtggacgttgccgagcaactggccatcgaa
cgcgcacgcgagctttttgattgcgactacgccaatgtccagccgcatgccggcgcccag
gccaatatggccgtctttctggcgcttacggaaccgggcgatacggtcatggggatgaac
ctggcgcagggcgggcacctgacccatggcaacccggccaacttttcgggacgcctgtat
cgcatcattccgtatggcctggacccggccagcggccatatcgactatgacgagatggag
cgcatcgcgttgcaggcacgtccgaaactgctgatcggcggtttctcggcctactcgcgt
tacaaggactgggcccgcatgcgtcagatcgccgacaaggcaggcgcgctgttctgggtc
gacatggcacacgtggccggcctggtggccgccggcgagtatcccgaccccctgccgcac
gcgcacgtggtgaccacgaccacgcacaagaccttgcgcgggccgcgcggcgggctgatc
ctggccaagggtcaggacgaggcgttctacaagaaactcgattctgccgtgttcccgggc
gtgcagggcgggcctttgatgcaccagatcgcagccaaggcgattgcctttcgcgaagcg
ctgcagccggagttcaagacctaccagaggcaggtcgtgaccaatgcgcgcgcaatggcc
gccgtgatccagcaacgcggctatcgcattgtttccggcggcaccgacaaccacctgatg
ttgattgacctgtctgcgcaaccgtatacgggcaaggaggcggacgcggccctggcggat
gcctacatcacggccaacaagaacagcgtgccgaacgatccgcgttcgcctttcgtgact
tcggggctgcgcatcggcacgccggccgtcaccacgcggggttttggcgtgtccgaatgc
gagcagctggcgggctggttgtgcgatgtgctggacgccctgggcagcgccgatgcgcag
cgccagggcgccgtgcgcgatcaggtgcgcgagcaggtggtggccctttgccgccggcat
ccggtatacggctaa
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