Bordetella trematum: SAMEA390648702959
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Entry
SAMEA390648702959 CDS
T04322
Symbol
gabR_4
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrm03000
]
SAMEA390648702959 (gabR_4)
Transcription factors [BR:
btrm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA390648702959 (gabR_4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
HTH_36
DUF4916
Motif
Other DBs
NCBI-ProteinID:
SAI71901
UniProt:
A0A157SNM9
LinkDB
All DBs
Position
1:complement(3146518..3147990)
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AA seq
490 aa
AA seq
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MFKHAQLETVKAWLADPAHGALALHARIQRAVRQLILDGTLGVGKPLPASRALAASLGVS
RDTVEAAYGQLHAEGFIERRVGSGSFVSERARRAPGRRAARAWAGVSAPLSRRGQALYDS
GGVRDFPAPRPFAPGVPETRSFPLATWERLQRQVLRDHGHQALAHSPPQGMLPLRRAIAD
YVNLERGAQASPEQVLVLTSSQQAMALCAQLLLDPGDTIAIEDPVYPGARKAFEAAGLRT
APIALDAQGMQVALLQALAPAPKAVFLTPSHQFPTGVTLALDRRLAVIEWAQRQQAWIIE
DDYDSEFHYAGKPMACVQGLDRHGRTIYIGTFTKSLFPGLRIGYMVLPPALVAPMTVART
LLDGHSAPLPQLTLARFMEAGHFGAHVRAMRAVYADRRDVLARLLRRHLGDMLTPQVPAG
GMQLPCLLADGLSEPALIALAARRQIELTGLTPLHQLTPAAPGVLMGFAAYAPRELQAAV
KLLSGVWREA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaagcacgcccagctggaaaccgttaaagcctggctcgccgatcccgcgcatggc
gcgctggcgctgcacgcgcgcatccagcgcgccgtgcgccagctgatcctggacggcacc
ctgggcgtgggcaagcccctgccggcctcccgcgctctggccgcctcgctgggcgtctcg
cgcgatacggtggaggcggcctacggccagctgcatgccgagggcttcatcgaacgacgc
gtcggtagcggcagcttcgtctcagagcgcgcccggcgcgcgccgggacggcgcgccgcc
cgcgcctgggccggtgtatcggcgcccctgagccggcgcggccaggcgctttacgacagc
ggcggcgtgcgggacttccccgctccgcgcccttttgcgcccggcgtaccggagacccgc
agttttccgttggccacctgggagcgtctgcaacgccaggtgctgcgcgatcacggccat
caggccctggcgcacagcccgccgcaaggcatgctgccgctgcgccgtgccatcgcggac
tacgtcaacctggagcgcggcgcccaggccagccccgaacaggtgctggtgctgaccagt
tcgcagcaggccatggccttgtgcgcccagctgctgctggatccgggagacaccatcgcg
atcgaagaccccgtttatcccggcgcgcgcaaggccttcgaggcggccggcctgcgcacc
gcacccatcgcgctcgatgcacagggcatgcaggtcgcgctgctgcaggcgctggcgccg
gcgcccaaggccgttttccttacgccatcgcaccagttccccaccggagtgaccctggcg
ctggaccggcgcctggccgtgatcgaatgggcccagcgccaacaggcctggatcatcgag
gacgactacgacagcgagttccattacgccggcaagcccatggcctgcgtccagggtctg
gaccggcacggtcgcacgatctatatcgggaccttcaccaaatcgctctttccgggactg
cgcatcggctacatggtgctgcccccggcgctggtggcgcccatgacggtggcacgcacc
ctgctcgatggccatagcgccccactgccccagctgacgctggcgcgcttcatggaggcc
ggccatttcggcgcccatgtgcgcgccatgcgggccgtgtatgccgacaggcgcgacgtg
ctggcgcggctgctgcgtcgccatctgggcgatatgctcacgccgcaggtgccggccggc
ggcatgcagctgccctgtctgctggccgacgggctgtccgaacccgcgctcatcgccctt
gcggcgcgccggcagatcgaactcaccggcctgacgccactgcatcagctgaccccggct
gcgccgggcgtgctgatgggctttgccgcctatgcgccgcgcgaactgcaggccgcggtc
aagctcctgtctggcgtatggcgcgaggcctga
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