Bordetella trematum: SAMEA390648703053
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Entry
SAMEA390648703053 CDS
T04322
Symbol
gabR_6
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
btrm03000
]
SAMEA390648703053 (gabR_6)
Transcription factors [BR:
btrm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA390648703053 (gabR_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
DUF7650
HTH_36
Motif
Other DBs
NCBI-ProteinID:
SAI72118
UniProt:
A0A157QND8
LinkDB
All DBs
Position
1:3278916..3280463
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AA seq
515 aa
AA seq
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MKELILSERVLQRLDRRATVALSRQVCDTLRALILAGELPAGAKMPATRVLAADTALSRN
TILHAYDQLTAEGYLTAAFGSGTFVSDTVPQPQEAWSDEPDTQPPATPFLLSRRGSKLVQ
EASASDRQLGAFVSGVPDVSLFPRAIWNRLLSRRWRQQTPELLTYSYGAGYLPLRQAVAE
HLRLARSVRCEADQVVITTGIHQSISLLARLLGDHGNTAWMEDPGYWGARATLVACGITP
VPVPVDEEGMAPQAEQLQQPPRFIFLTPSHQYPLGMIMSLARRRMLLEYAHKRGAWIIED
DYDSEYRFDGRPIGSLQGLDPHDRVLYLGTFSKTLFPGFRMGYMVLPRRLAAHFATGLSE
LYREGRLMDQAVLADFIEGGHYASHIRRMKQCYATRQALLRAAVARHFGADWPVSTHEAG
LHLVLHLPEGVDDLGISIAARTLGLTARPLSRYYANEAWARPGLLLGYACVPDEEIAPAF
ERLVQVITPALEHTRRTQGRAPSSERINDQAWSGA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagagctgattctgtcggagcgagtgctgcaacgtctggaccggcgcgccacggtg
gcgctgtcgcgccaggtctgtgacaccttgcgcgccctgatcctggcgggcgagctaccc
gccggggccaagatgcccgccacccgggtgctggctgccgacacggccctgtcgcgcaac
accatcctgcacgcctatgaccagctcaccgccgaaggctatctgaccgccgccttcggc
agcggcacctttgtctccgataccgtgccccagccccaggaggcctggagcgacgagcct
gacacgcagccgccggccacgccgtttctcttgtcgcggcgaggcagcaagctggtgcag
gaggcctcggcctcggatcgccagctcggtgccttcgtctccggcgtgcctgacgtatcg
ctctttccccgcgccatctggaatcgcctgctcagccgtcgctggcgtcagcagacaccg
gaacttctgacctattcctatggcgccggctatctgccgctgcgccaggccgtggccgaa
cacctgcgtctggcgcgctcggtccgctgcgaggccgatcaggtcgtcatcaccaccggt
atccatcagtcgatcagcctgcttgcgcgtttgctgggcgatcacggcaacaccgcctgg
atggaagacccgggttactggggcgcgcgcgccacgctcgtggcctgtggcatcacgccg
gtgccggtgccggtcgacgaagaaggcatggcgccgcaggccgaacagctgcaacagccg
ccgcgcttcatcttcctcaccccatcgcaccagtatccgttgggcatgatcatgagcctg
gcgcgccgccgcatgctgctcgagtacgcccacaagcgtggcgcctggatcattgaagac
gactacgacagcgagtaccgttttgacggccggcccatcggctcgctgcagggcctggat
ccccacgatcgcgtgctgtacctcggcaccttctccaagacgctgttcccaggttttcgc
atgggctacatggtgctgccgcgccgcctggccgcgcatttcgcgaccggtctgtccgag
ctgtaccgcgaagggcgcctgatggaccaggcggtgctggccgacttcatcgagggcggc
cactacgccagccacatccgccgcatgaagcagtgctacgccacccgccaggcgctgctg
cgcgcggcggtggcgcgtcatttcggcgccgactggccggtctcgacccatgaggccggc
ctgcatctggtgctgcatctgcccgaaggcgtggatgacctcggcatttccatcgccgcc
cgtaccctggggctgacggcccggccgctgtcgcgctattacgccaacgaggcctgggcc
cggccggggttgctgctgggttatgcctgtgtgcccgacgaggaaatcgctccggccttc
gaacggctggtgcaggtcatcacgccggcgctggagcatacccgacgcacgcaagggcgc
gccccgtccagcgaacgcatcaacgaccaggcctggagcggcgcctga
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