Bordetella trematum: SAMEA390648703066
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Entry
SAMEA390648703066 CDS
T04322
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
btrm
Bordetella trematum
Pathway
btrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA390648703066 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648703066 (xthA)
Enzymes [BR:
btrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMEA390648703066 (xthA)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMEA390648703066 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF7316
Motif
Other DBs
NCBI-ProteinID:
SAI72147
UniProt:
A0A157QN97
LinkDB
All DBs
Position
1:complement(3293507..3294289)
Genome browser
AA seq
260 aa
AA seq
DB search
MQLATWNVNSLNVRLPQVLEWLAANPVDALCLQELKLSDDKFPLQAFTDIGYHAAWAGQK
TYNGVAILSREPGFALQRNIPGYEDPQQRVIAVTLPSPAGDVRVICAYCPNGQSLDSDKY
IYKLEWFAALRDWLKEELQTYPRLAILGDYNVAPADIDVHNPEKWEGQVHVSEPERAAWR
ALLNLGLSDVFRDFEQPEKAFSWWDYRQFAFRRNAGLRIDHILLSQDLKQACTACVIDKG
PRGNPQPSDHTPVIATLAWN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagccacctggaacgtcaactccctcaatgtccgcctgccgcaagtgctcgaa
tggctcgccgccaacccggtcgatgccctgtgcctgcaggagctcaagctgagtgatgac
aagttcccgctgcaggccttcaccgatatcgggtatcacgccgcctgggctggccagaaa
acctataacggcgtggccatcctgtcgcgcgagccgggcttcgccttgcagcgcaatatc
ccgggttatgaagatccgcagcaacgcgtgatcgcggtgaccctgcccagcccggccggg
gacgtgcgcgtcatctgcgcctactgccccaacgggcaaagcctggacagcgacaagtac
atctacaagctggaatggttcgcggcgctgcgcgactggctcaaggaagagttgcagacg
tatccgcgcctggccattctgggcgactacaacgtcgcgccggccgacatcgacgtgcac
aacccggaaaaatgggaaggccaggtccatgtctcggagccggagcgtgccgcctggcgc
gccctgctcaatctcggcctgagcgatgtcttccgcgatttcgagcaacccgagaaggca
ttcagctggtgggactaccgtcagttcgccttccgccgcaatgccgggctgcgcatcgac
cacattctcctgtcgcaagacctgaaacaggcctgcacggcctgcgtgatcgacaagggg
ccgcgcggcaacccgcagccttcggaccacaccccggtcatcgcgacgctggcctggaac
tag
DBGET
integrated database retrieval system
