Bordetella trematum: SAMEA390648703267
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Entry
SAMEA390648703267 CDS
T04322
Symbol
fadB1_2
Name
(GenBank) fatty oxidation complex alpha subunit
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
btrm
Bordetella trematum
Pathway
btrm00071
Fatty acid degradation
btrm00362
Benzoate degradation
btrm00650
Butanoate metabolism
btrm01100
Metabolic pathways
btrm01120
Microbial metabolism in diverse environments
btrm01200
Carbon metabolism
btrm01212
Fatty acid metabolism
Module
btrm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAMEA390648703267 (fadB1_2)
09103 Lipid metabolism
00071 Fatty acid degradation
SAMEA390648703267 (fadB1_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SAMEA390648703267 (fadB1_2)
Enzymes [BR:
btrm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SAMEA390648703267 (fadB1_2)
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Gene cluster
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Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_binding_7
DUF1707
Pyr_redox_2
HTH_31
ApbA
Motif
Other DBs
NCBI-ProteinID:
SAI72562
UniProt:
A0A157SQ72
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All DBs
Position
1:3501354..3503438
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AA seq
694 aa
AA seq
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MTQLAYQVLDGIALIVMQNPPVNSMGHIQRRQILNALERSGEDAQIRAVVITGSEEVFSG
GADITEFGTPKANRQPTLRDIIEALDEFPKPVIAAIDGICLGGGLELALAAHYRIATRRA
VVGLPEVKLGLLPGAGGTQRLPRLVGLERGLDMIVHGKKERAAALADTRLFDLIVEDGVA
DAAVAFARRRLEAGDAPPRTRDIRMTEPDAEAFLQVVRRNISAANPRFPAPMQCVEAVAG
CLLPFDEGIRKERALFVQLMSTPESAALRHVFAAERAAAKVPGITKETPRRVIQRVGVVG
AGTMGTGICMSFLNAGIPVTLLDLDGDVLARGVATIRKHYDATMRKGRISATELEKRMSL
LGTTRMYGDLKDADLVVEAVFEDMAIKEKVFRALDEALKPGAILATNTSTLDVNVIAGFV
KRPEDVLGLHFFSPANVMRLLEIVRADRTSAEVLATALAVAKTIGKQPVVSGVCDGFIGN
RMLNGYRTAGEELLLLGASPREIDRALEDFGFAMGPYRMGDLAGLDIGWAIRKRRQAEHP
DRDFSSVADRLCEAGRFGQKTGAGWYRYEEGGRIPHEDPVVADILDAYRRENSIEPSSFT
PREIVDRCVFALVNEGARIVEEGVSQRVSDLDIVYLNGYGFPLQRGGPMHYAQQVGIFNV
VRALRRFAAHSRIPDFWQPAALLSSLANSGEALT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagctcgcctaccaagtactcgacggcatcgccctgatcgtgatgcagaatccg
ccagtcaatagcatggggcatattcagcgccggcagatcctgaacgcgttggagcgatcc
ggggaggatgctcagatccgggcagtggtcataaccggctctgaagaggtgttctcgggc
ggcgcggatatcaccgagttcggaacgcccaaggcgaaccggcaacccacgctgcgcgac
atcatcgaagccctcgatgaatttccaaaacccgttatcgccgccatcgacggcatttgc
ctgggcggcggactggaactggccctggcggcccattaccgcatcgccacacggcgcgct
gtggtgggattgcctgaggtgaagctggggctcttgcccggcgccggaggcactcagcgc
ttgccgcgtctagtcgggctggagcggggcctggacatgatcgtacatggcaaaaaggag
agggcggcagcgctggccgatacccgcctgtttgacctgatagtcgaggacggcgtcgcg
gatgcagccgtcgcatttgcccggcggcgccttgaggctggcgatgctcccccccggacg
cgagacatccgcatgacggagccggacgcggaggctttcctacaggtcgtgcgccgcaac
atctccgccgccaatccccggtttccggcgcccatgcaatgcgttgaggcggtcgccggc
tgtctgctccctttcgatgagggaatccgcaaggaaagggcgcttttcgttcaactgatg
agcacgccggaatcggcggcgctaaggcatgtcttcgcggccgaacgggctgcggcaaag
gtgccgggaatcacgaaggaaacgccgcggcgggtgatccagcgagtcggcgttgtcggc
gccggcactatgggcaccggaatctgcatgagcttcctgaacgccggcatacccgtgacg
ttgctcgacctggatggcgacgtgctcgcccggggcgtggcgacaatacgcaagcattac
gacgcgacgatgcgcaaggggcgaatcagcgcaaccgaactcgaaaagcgcatgtccctg
ctcgggacgacacgcatgtatggtgacctgaaggatgccgacttggtcgtcgaggcggtc
tttgaagacatggcgatcaaagaaaaggtctttcgtgcacttgacgaagccctcaagccc
ggcgcaatcctggccaccaacacgtccacgcttgacgtgaatgtcatcgccggattcgtc
aaacgtcctgaagatgtgctcgggctgcacttcttcagtcccgcaaacgtgatgcggctg
ctcgagatcgttcgcgcagaccggacatccgctgaagttcttgcgacggccctcgcggtt
gccaaaaccatcggcaaacagcctgtggtatcgggcgtgtgcgatggcttcattggtaac
cgcatgctcaatggctatcggactgcaggcgaagaactgctgttgcttggtgcatcgccg
cgcgagatcgacagggctctggaggacttcggcttcgcaatgggaccatatcgaatgggt
gacctggccggcctggacattggctgggccatccgcaagcggaggcaagccgagcatcca
gaccgggatttttcctccgtggcggatcggctatgcgaggccgggcgcttcggtcagaaa
actggcgcgggctggtatcgatacgaagagggaggccgcatccctcatgaggatcccgtc
gtcgcggacattctcgatgcttaccgcagggagaattcgatcgagccaagcagtttcacg
ccgcgcgagatcgttgaccgttgcgtgtttgcgcttgtcaatgaaggtgcccggatcgtg
gaggagggcgtctcacagcgggtctccgacctcgatattgtttatctgaatggctatgga
tttccgctgcagcgtggcggccccatgcactatgcgcagcaggtcgggatcttcaacgtc
gttcgcgccttgcggcgcttcgccgcgcactcgcgaataccagatttctggcagcccgca
gcattgctgagcagcctggccaattccggcgaagcattgacgtaa
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