Bordetella trematum: SAMEA390648703738
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Entry
SAMEA390648703738 CDS
T04322
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
btrm
Bordetella trematum
Pathway
btrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA390648703738 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648703738 (xseB)
Enzymes [BR:
btrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAMEA390648703738 (xseB)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAMEA390648703738 (xseB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
HBM
Motif
Other DBs
NCBI-ProteinID:
SAI73522
UniProt:
A0A157SSV3
LinkDB
All DBs
Position
1:complement(3996469..3996711)
Genome browser
AA seq
80 aa
AA seq
DB search
MSSSPQALPQDFETALAELEALVQTMENGSLPLEQSLAAYRRGVELTRICQERLSQAEQQ
VKVLEGDLLRPLQAGAIDDE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttcatcgccgcaggccttgcctcaagattttgaaaccgcgctggccgaattggaa
gcgctggtgcaaaccatggaaaacggttcgctgccgctggagcagtcgctggctgcctac
cggcgcggcgtggagctgacccgcatctgccaggagcgcctgtcccaggccgagcagcag
gtcaaagtgctggaaggcgatctgttgcggccgctgcaggccggtgccattgacgacgaa
taa
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