Bordetella trematum: SAMEA390648703775
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Entry
SAMEA390648703775 CDS
T04322
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
btrm
Bordetella trematum
Pathway
btrm00540
Lipopolysaccharide biosynthesis
btrm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA390648703775 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
SAMEA390648703775 (rfaF)
Enzymes [BR:
btrm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
SAMEA390648703775 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
Core region
SAMEA390648703775 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
SAI73608
UniProt:
A0A157SSY9
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All DBs
Position
1:4034550..4035518
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AA seq
322 aa
AA seq
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MSALPTLYVRVPNWVGDVCMSLPSLRLLQASGMPLVICARPWARDLLDGLPKSDFLPMSG
RWRSDRATVARHRAAQGRPAARGLLLPDSLSSAAVFRLAGVPAAGYRDDGRSLLLRWPVA
KPSAPLHAVQSWYYLTRQALQTWGLPAGAPDAGPSLDLPLTERHQSEARSALAQAGLAGR
PFVLIAPTATGLHKGKIKVWPQFDALTRRLQSEGHTVVMCPPAQEAQAAREAAPSAQLLP
PLGLGAFASLTASAALVICNDSGVSHLAAAANARELTLFGVTRRERTGPWSARAVCLGTE
DAWPALPEVEGTALRLLTDTGT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcttcccaccctttatgtccgcgtgcccaattgggtgggcgacgtctgcatg
agcctgcccagcctgcgtctgctgcaggccagcggcatgccgctggtgatctgcgcccgt
ccctgggcgcgcgacctgctcgacgggctgcccaagtcggattttctgcccatgagcggg
cgctggcgcagcgatcgcgccaccgtcgcgcgccaccgcgccgcccagggccgtccggcg
gcccggggcctgttgctgcccgactccttgtccagcgcggcggtcttccgcctggccggc
gtgcccgccgcaggctaccgcgacgatgggcgcagtcttttgctgcgctggcctgtcgcc
aaaccgtccgcgccgctgcacgccgtgcaatcctggtactacctgacgcgccaggctctg
cagacctggggcctgcctgccggcgcgccggatgcgggcccctcgctggatctgccattg
accgagcgccatcagagcgaggcccgctccgccttggcacaggccggcctggcggggcgc
cctttcgtgttgatcgcccccaccgcgaccggcctgcacaaagggaaaatcaaagtgtgg
cctcagttcgacgcgttgacgcgacgcttgcaaagcgaggggcataccgtggtaatgtgc
ccccctgcgcaggaagcgcaggcagcccgggaggccgcgcccagcgcgcagctcctgccg
cccttgggcctgggcgccttcgccagcctgaccgcaagcgccgcgctcgtcatctgcaat
gattccggcgtctcgcatctggctgccgcggcgaacgcccgcgaactcaccctgttcggc
gtgacgcggcgcgagcgcaccggcccctggtcggcgcgtgccgtatgcctggggaccgaa
gacgcctggcccgcactgcccgaagtcgagggcacggcgctgcgactgttgaccgacaca
ggcacttag
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integrated database retrieval system
