Bordetella trematum: SAMEA390648703845
Help
Entry
SAMEA390648703845 CDS
T04322
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
btrm
Bordetella trematum
Pathway
btrm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SAMEA390648703845 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
btrm03011
]
SAMEA390648703845 (rpsA)
Ribosome [BR:
btrm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SAMEA390648703845 (rpsA)
Bacteria
SAMEA390648703845 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
TOBE
Motif
Other DBs
NCBI-ProteinID:
SAI73783
UniProt:
A0A157SUN1
LinkDB
All DBs
Position
1:complement(4108222..4109934)
Genome browser
AA seq
570 aa
AA seq
DB search
MSSVSTTAFGGESFADLFAESLKSQDMKSGEVISAEVVRVDHNFVVVNAGLKSEALIPLE
EFLNDQGELEVQPGDFVSVAIDSLENGYGDTILSRDRAKRLSAWLQLEKALENGELVTGT
ITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKTLEFKVIKLDRKRNNVVLSRR
QVLEASMGEERQKLLETLHEGAVVKGVVKNITDYGAFVDLGGIDGLLHITDMAWRRVRHP
SEVLQVGQEVEAKVLKFDQEKSRVSLGVKQLGEDPWVGLARRYPQGTRLFGKVTNLTDYG
AFVEVEAGIEGLVHVSEMDWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLGMKQCRQ
NPWEEFATNFKRGDKVRGAIKSITDFGVFVGLPGGIDGLVHLSDLSWTETGEEAVRNFKK
GDEIEAVVLGIDTEKERISLGIKQLEGDPFNNFVATYDKGAVVPGTIKSVEPKGAVVTLS
VDVEGYLRASEISSGRVEDATTVLKAGDNLEAMIINIDRKARSIQLSVKARDNAETADTI
QRMSEASASSGTTNLGALLKAKLDQQRNDG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtttccactaccgccttcggtggcgaaagcttcgccgacctgtttgccgag
agcctcaagagccaggacatgaagtccggcgaggtcatcagcgccgaagtcgttcgcgtc
gaccataactttgtcgtcgtcaacgccggtctgaagtccgaggctctgattcccctggaa
gagttcctgaacgaccagggcgaactcgaagtccagcccggcgatttcgtttccgtggcg
atcgattcgctggaaaacggctacggcgacaccatcctgtcgcgtgaccgcgccaagcgt
ctgtcggcctggctgcaactggaaaaggccctggaaaatggcgagctggttaccggcacc
atcacgggcaaggtcaagggcggcctgaccgtcatgaccaacggcatccgcgccttcctg
ccgggttcgctggtcgacctgcgtccggtcaaggacacgaccccgtacgagggcaagacg
ctcgagttcaaggtcatcaagctggaccgcaagcgcaacaacgtcgtgctgtcgcgtcgc
caggtgctggaagccagcatgggcgaagagcgccagaagctgctcgaaaccctgcacgaa
ggtgcggtggtcaagggcgtggtcaagaacatcaccgactacggcgcgttcgtggacctg
ggcggcatcgacggcctgctgcacatcaccgacatggcctggcgccgtgtgcgtcacccg
tccgaagtcctgcaagtgggtcaggaagtcgaagccaaggtcctcaagttcgaccaggaa
aagagccgcgtgtcgctgggcgtcaagcagctgggcgaagatccgtgggtgggcctggct
cgccgctacccgcaaggcacccgtctgttcggcaaggtgaccaacctgaccgactacggc
gccttcgttgaagttgaagccggcatcgaaggtctggtgcacgtttccgaaatggactgg
accaacaagaacgtcgatccgcgcaaggttgtcaccctgggcgaagaagtcgaagtcatg
gtcctggaaatcgacgaagaccgtcgtcgtatttcgctgggcatgaagcagtgccgccag
aacccgtgggaagagttcgccacgaacttcaagcgcggcgacaaggtgcgcggcgccatc
aagtcgatcaccgacttcggcgtgttcgtcggcctgcccggcggcatcgatggcctggtt
cacctgtccgacctgtcgtggaccgaaaccggcgaagaagccgttcgcaacttcaagaag
ggcgacgagatcgaagccgtggttctgggcatcgataccgagaaggagcgcatctccctg
ggtatcaagcaactggaaggcgaccccttcaacaacttcgtcgccacctacgacaagggc
gccgtggtgccgggcacgatcaagtcggtcgagcccaagggtgccgtggtgacgctgtcg
gtcgacgtcgaaggctacctgcgcgcttccgagatctcctcgggtcgtgtcgaagatgcc
accaccgtgctgaaggccggcgacaacctcgaagccatgatcatcaacatcgatcgcaag
gcgcgttcgatccagttgtcggtcaaggctcgcgataacgccgaaaccgctgacaccatc
cagcgcatgtccgaagccagcgcctcgtcgggtaccaccaacctgggcgcgctgctcaag
gccaagctggaccaacagcgcaacgacggctga
DBGET
integrated database retrieval system