Bordetella trematum: SAMEA390648703845
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Entry
SAMEA390648703845 CDS
T04322
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
btrm
Bordetella trematum
Pathway
btrm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SAMEA390648703845 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
btrm03011
]
SAMEA390648703845 (rpsA)
Ribosome [BR:
btrm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SAMEA390648703845 (rpsA)
Bacteria
SAMEA390648703845 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
TOBE
Motif
Other DBs
NCBI-ProteinID:
SAI73783
UniProt:
A0A157SUN1
LinkDB
All DBs
Position
1:complement(4108222..4109934)
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AA seq
570 aa
AA seq
DB search
MSSVSTTAFGGESFADLFAESLKSQDMKSGEVISAEVVRVDHNFVVVNAGLKSEALIPLE
EFLNDQGELEVQPGDFVSVAIDSLENGYGDTILSRDRAKRLSAWLQLEKALENGELVTGT
ITGKVKGGLTVMTNGIRAFLPGSLVDLRPVKDTTPYEGKTLEFKVIKLDRKRNNVVLSRR
QVLEASMGEERQKLLETLHEGAVVKGVVKNITDYGAFVDLGGIDGLLHITDMAWRRVRHP
SEVLQVGQEVEAKVLKFDQEKSRVSLGVKQLGEDPWVGLARRYPQGTRLFGKVTNLTDYG
AFVEVEAGIEGLVHVSEMDWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRISLGMKQCRQ
NPWEEFATNFKRGDKVRGAIKSITDFGVFVGLPGGIDGLVHLSDLSWTETGEEAVRNFKK
GDEIEAVVLGIDTEKERISLGIKQLEGDPFNNFVATYDKGAVVPGTIKSVEPKGAVVTLS
VDVEGYLRASEISSGRVEDATTVLKAGDNLEAMIINIDRKARSIQLSVKARDNAETADTI
QRMSEASASSGTTNLGALLKAKLDQQRNDG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtttccactaccgccttcggtggcgaaagcttcgccgacctgtttgccgag
agcctcaagagccaggacatgaagtccggcgaggtcatcagcgccgaagtcgttcgcgtc
gaccataactttgtcgtcgtcaacgccggtctgaagtccgaggctctgattcccctggaa
gagttcctgaacgaccagggcgaactcgaagtccagcccggcgatttcgtttccgtggcg
atcgattcgctggaaaacggctacggcgacaccatcctgtcgcgtgaccgcgccaagcgt
ctgtcggcctggctgcaactggaaaaggccctggaaaatggcgagctggttaccggcacc
atcacgggcaaggtcaagggcggcctgaccgtcatgaccaacggcatccgcgccttcctg
ccgggttcgctggtcgacctgcgtccggtcaaggacacgaccccgtacgagggcaagacg
ctcgagttcaaggtcatcaagctggaccgcaagcgcaacaacgtcgtgctgtcgcgtcgc
caggtgctggaagccagcatgggcgaagagcgccagaagctgctcgaaaccctgcacgaa
ggtgcggtggtcaagggcgtggtcaagaacatcaccgactacggcgcgttcgtggacctg
ggcggcatcgacggcctgctgcacatcaccgacatggcctggcgccgtgtgcgtcacccg
tccgaagtcctgcaagtgggtcaggaagtcgaagccaaggtcctcaagttcgaccaggaa
aagagccgcgtgtcgctgggcgtcaagcagctgggcgaagatccgtgggtgggcctggct
cgccgctacccgcaaggcacccgtctgttcggcaaggtgaccaacctgaccgactacggc
gccttcgttgaagttgaagccggcatcgaaggtctggtgcacgtttccgaaatggactgg
accaacaagaacgtcgatccgcgcaaggttgtcaccctgggcgaagaagtcgaagtcatg
gtcctggaaatcgacgaagaccgtcgtcgtatttcgctgggcatgaagcagtgccgccag
aacccgtgggaagagttcgccacgaacttcaagcgcggcgacaaggtgcgcggcgccatc
aagtcgatcaccgacttcggcgtgttcgtcggcctgcccggcggcatcgatggcctggtt
cacctgtccgacctgtcgtggaccgaaaccggcgaagaagccgttcgcaacttcaagaag
ggcgacgagatcgaagccgtggttctgggcatcgataccgagaaggagcgcatctccctg
ggtatcaagcaactggaaggcgaccccttcaacaacttcgtcgccacctacgacaagggc
gccgtggtgccgggcacgatcaagtcggtcgagcccaagggtgccgtggtgacgctgtcg
gtcgacgtcgaaggctacctgcgcgcttccgagatctcctcgggtcgtgtcgaagatgcc
accaccgtgctgaaggccggcgacaacctcgaagccatgatcatcaacatcgatcgcaag
gcgcgttcgatccagttgtcggtcaaggctcgcgataacgccgaaaccgctgacaccatc
cagcgcatgtccgaagccagcgcctcgtcgggtaccaccaacctgggcgcgctgctcaag
gccaagctggaccaacagcgcaacgacggctga
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integrated database retrieval system
