Bordetella trematum: SAMEA390648703852
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Entry
SAMEA390648703852 CDS
T04322
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btrm03032
]
SAMEA390648703852 (gyrA)
03400 DNA repair and recombination proteins [BR:
btrm03400
]
SAMEA390648703852 (gyrA)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMEA390648703852 (gyrA)
DNA replication proteins [BR:
btrm03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA390648703852 (gyrA)
DNA repair and recombination proteins [BR:
btrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMEA390648703852 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
SAI73801
UniProt:
A0A157Q385
LinkDB
All DBs
Position
1:complement(4116434..4119082)
Genome browser
AA seq
882 aa
AA seq
DB search
MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM
RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT
NIPPHNLGEVVEGCLYCLRNPECTIDELIEIIPAPDFPTGGIIYGMTGVREGYRTGRGRV
IMRAKTHFEDLEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG
MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIDYFLQHRRE
VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARGWDSSLV
REMLDRVDGDAVGGRSAFRPDDLAISFGLQSDGLYHLSDVQAQEILNMRLQRLTGLEQDK
IIGEYKDVMATIADLLDILARPERITGIISEELQAIKAEFSTSAKDTRRSDIEMNATELD
TEDLITPMDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATQMKENDWIDQLFIANTHDY
LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKITVVLPVKEFSEDHYVFMA
TSRGTVKKTTLADFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVRFDEN
DVRPMGRAARGVRGMMLEDGQTVIALLVAGDESQSVLTATENGYGKRTSIAEYTRHGRGT
KGMIAIQTTSRNGRVVGAVLVNPSDEIMLITTGGVLVRTRVSEIREMGRATQGVTLISVD
DGSVLSGVRRVVESDADDDEGLDEDTEGGDDSAQTESTEPTE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggattcctttgccaaggagacgcttccggtttcgctggaagaagagatgcgccgcagt
tacctcgactacgcgatgagcgtcatagtcgggcgagccctgccggatgtgcgcgacggc
ttgaagcccgtgcaccggcgggtgctgtatgcgatgcacgaactcaacaacgattggaat
cgcgcctacaagaagtcggcgcgtatcgtcggtgatgtgattggtaaatatcacccgcac
ggcgaccaatccgtctatgacaccatcgtccgcatggcgcaggatttctccatgcgctac
atgctggtcgatggtcaggggaacttcggctccatcgacggcgacaatgccgcggcgatg
cgttacaccgaaatccgcctggccaagatcgcccacgagctgctggctgacatcgaccag
gaaacggtcgatttcggccccaactacgatggcagcgagcaggaaccgctgttgctgccg
tcgcgcctgcccaacctgctggtcaacggcagttcgggcatcgccgtcgggatggccacc
aacattccgccgcacaacctgggcgaagtggtcgaaggctgcctgtactgcctgcgcaac
ccggaatgcacgattgatgagctcatcgagatcatcccggcgccggacttccccacgggc
gggatcatctacggcatgaccggcgtgcgcgagggttaccgcaccggccgcgggcgcgtc
atcatgcgcgccaagacgcacttcgaagacctggagaagggcaaccgccaggccatcgtg
gtcgacgccattccctaccaggtcaacaagaagaccctgcaggagcgcatcgccgagctg
gtcaacgacaagaagatcgaggggatctcggacatccgcgacgagtcggacaaggacggc
atgcgcctggtcatcgagctcaagcgcggtgaagtccccgaggtggtgctcaacaatctc
tacaagaacacgcagctgcaggacaccttcgggatgaacctggtggcgctggtcgacggc
cagccccgcctgctcaacctgaagcaactgatcgactacttcctgcagcatcgccgcgaa
gtggtcacgcgccgcaccgtcttccagttgcgcaaggcccgcgagcgcggccacgtgctg
gaaggcctggcggtggcgctggccaacatcgacgatttcatcgccatcatcaaggcggcg
ccgaccccgccggtggcgcgccaggaactgatggcgcgcggctgggattcgtcgctggtg
cgcgagatgctggaccgtgtcgacggcgatgccgtcggcggccgcagcgccttccgcccg
gacgatcttgcgatcagcttcggcttgcagtccgatggcctgtaccacctgtcggatgtg
caggcccaggaaatcctgaacatgcgcctgcagcgcctgaccggcctggagcaggacaag
atcatcggcgagtacaaggacgtgatggccacgatcgccgatctgctggacatcctggcg
cgccccgagcgcatcaccggcatcatcagtgaagagctgcaggccatcaaggccgagttc
tcgacctcggccaaggatacgcgtcgctcggatatcgagatgaacgccaccgagctcgac
accgaagacctgatcacgccgatggacatggtggtcacgttgtcgcacggcggctacatc
aagagccagccgctgtcggaataccgttcgcagaagcgtggcgggcgcggcaagcaggcc
acccagatgaaggaaaacgactggatcgaccagcttttcatcgccaacacgcatgactac
ctgctgtgcttctcgaaccgcggccgggtgtactggctgaaggtctgggaagtgccgcaa
ggcacgcgcaactcgcgcggcaagcccatcgtcaacatgttcccgctggccgacggcgag
aagatcaccgtggttctgccggtcaaggagttcagcgaagatcattacgtcttcatggcg
acctcgcgcggcacggtcaagaagaccacgctggccgatttctccaacccgcgcaaggcc
ggcatcatcgcggtcgacctcgatgacggcgactacctgatcggcgccgacctgaccgac
ggcaagcatgacgtgatgttgttctcggacgccggcaaggccgtgcgctttgacgagaac
gatgtgcggcccatggggcgtgccgcgcgcggcgtgcgcggcatgatgctcgaggatggc
cagaccgtgatcgcgctgctggtggccggcgacgaaagccagagcgtgctcaccgccacc
gagaacggctacggcaagcgcacgtccatcgccgagtacacccgtcatggtcggggcacc
aagggcatgatcgccatccagaccacctcgcgcaacggccgggtggtgggggccgtgctg
gtcaatccgagcgatgaaatcatgctcatcacgacgggcggcgtgctggtgcgtacccgg
gtgagcgagattcgcgagatgggccgtgccacgcaaggcgtcacgctgatcagcgtcgac
gatggcagcgtgctgtcgggcgtgcgccgcgtggtcgaaagcgatgccgacgacgatgaa
gggctggacgaggacaccgagggcggggatgattccgctcagactgaatcgactgaacct
acggagtaa
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