Bordetella trematum: SAMEA390648704080
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Entry
SAMEA390648704080 CDS
T04322
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btrm03016
]
SAMEA390648704080 (truB)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAMEA390648704080 (truB)
Transfer RNA biogenesis [BR:
btrm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMEA390648704080 (truB)
Prokaryotic type
SAMEA390648704080 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
SAI74155
UniProt:
A0A157Q8N8
LinkDB
All DBs
Position
1:complement(4339619..4340374)
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AA seq
251 aa
AA seq
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MAKRRGQPLDGVLLLDKPVGLSSNHALQRAKRTLDAAKAGHTGTLDPFATGLLLCCMGRA
TKISGAMLDADKTYRATIRFGEETDSGDLTGNIVAQAPADFAGVQEAALRDALSQFMGSI
EQIPPMYSALKRDGKPLYEYARAGIELERPPRQVTIHRLELLSWDSGQAEIEVACSKGTY
IRTLAQDIGRVLGCYGHLSALRRTEVGPFSLDRAVTLDALQAMPDPKTALLALHELPAGL
LPATLNQKDLL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgacgcgggcaaccgctcgatggggtattgctgctcgacaaacccgtgggt
ttgtcgagcaatcacgccctgcagcgcgccaaacgcacgctggacgcggccaaggccggt
cataccggcacgcttgatccgtttgccaccggcctgctgctgtgctgcatggggcgtgcc
accaagatttccggcgccatgcttgacgccgacaaaacctaccgggcgacgatacgcttt
ggcgaggaaaccgatagcggtgaccttaccggcaatatcgtcgcccaggcgccggctgat
tttgccggcgtccaagaggctgcgctgcgcgatgcactgtcacaattcatgggcagcatc
gagcagattccgccgatgtactctgccctcaagcgcgacggcaagccgctgtacgagtat
gcccgcgccggcatcgaactggaacgccctcccaggcaggtgaccatacaccgtctggaa
ctgctttcctgggattcgggccaggccgagatcgaagtcgcatgcagcaaggggacctat
atccgcaccctggcccaggacatcgggcgagtgctgggttgctatggccacctgtccgcg
ttgcggcgcaccgaagtcggtccgttttccctggaccgggcggtgacgctggacgcgttg
caggccatgccggaccccaagaccgctctgcttgcgctccatgaattgccggcgggcttg
ctgcccgctaccttgaaccaaaaggacctcctatga
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