Bordetella trematum: SAMEA390648704147
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Entry
SAMEA390648704147 CDS
T04322
Symbol
fadD_9
Name
(GenBank) substrate-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
btrm
Bordetella trematum
Pathway
btrm00061
Fatty acid biosynthesis
btrm00071
Fatty acid degradation
btrm01100
Metabolic pathways
btrm01212
Fatty acid metabolism
btrm02024
Quorum sensing
btrm04146
Peroxisome
Module
btrm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SAMEA390648704147 (fadD_9)
00071 Fatty acid degradation
SAMEA390648704147 (fadD_9)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SAMEA390648704147 (fadD_9)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA390648704147 (fadD_9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
btrm01004
]
SAMEA390648704147 (fadD_9)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
btrm04147
]
SAMEA390648704147 (fadD_9)
Enzymes [BR:
btrm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SAMEA390648704147 (fadD_9)
Lipid biosynthesis proteins [BR:
btrm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SAMEA390648704147 (fadD_9)
Exosome [BR:
btrm04147
]
Exosomal proteins
Exosomal proteins of breast milk
SAMEA390648704147 (fadD_9)
Exosomal proteins of breast cancer cells
SAMEA390648704147 (fadD_9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
SAI74313
UniProt:
A0A157LDW1
LinkDB
All DBs
Position
1:complement(4407019..4408518)
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AA seq
499 aa
AA seq
DB search
MRPQPHSTLLCEGQALDPAQQQERGLRLAQGLVQLGLQPGDVLAVLLKNCLQYADVVHAC
RLAGVVYCPINWHFTASEIAYLLEDSGAKALLSSQDLLDALQPALQTPIPRLVIDAASGG
CDYETWLAEQPLYDGPLVAPRGHMAYTSGTTGRPKGVVRDTFPIEELAQRQAVNRKLVET
AYGLRHGARTLLTAPIYHSAPSLYFQNALMLSECVVLTSRFDPEQFLQLVQTHRIDTAYM
VPIMYVRLLRLPAQVRQRYDISSLRFIASTGSPCAPEVKKAMIEWMGPIIHETYASSEAG
LVTFMHAQDALSRPGSAGRPLLEAKVRILDKARQPVPVGEVGLIYVRQPAYADFTYRGNE
AARRAIAFDDLITLGDMGYLDEEGFLYVCDRDSDLVISGGVNIYPAEIENELLKHPQVSD
CAVIGVPDPEYGEKLLALVETAGEPDELQKALPQWLKGRLAAYKLPRGFVFQTLPRDDNG
KIAKRKLRDAYWGSSQRKV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgcaaccccattccactttgctgtgcgaagggcaggcgctggaccccgcgcag
caacaggagcgcggcctgcgcctggcgcaggggttggtgcaattgggtctgcagcccggc
gatgtgcttgccgtgttgctgaaaaactgcctgcagtatgccgatgtggtgcatgcctgc
cgtctggcgggtgtggtgtactgcccgatcaactggcattttacggcctcggaaatcgct
tacctgctggaagacagcggcgccaaggccttgctaagcagccaggatctgctcgatgcg
ctgcagccggcgttgcagacgccgattcccaggctcgtcatcgacgcggcctctggcggc
tgcgactacgagacctggctggccgagcagccgctctatgatggcccgctggtcgccccc
cgtggccatatggcctacacgtcaggcacgaccggtcgtcccaagggcgtggtgcgcgat
acattcccgatcgaggaactggcgcagcgccaggccgtcaaccgcaaactggtggagacg
gcctatggtctgcgccacggcgcgcgcaccctgctcacggcgcccatctatcacagcgca
ccaagcctgtacttccagaatgccttgatgctcagcgagtgcgtggtgctgacttctcgc
ttcgatccggagcagtttctgcaactggtccagacgcaccgcatcgatacggcctacatg
gtgcccatcatgtatgtgcgcctgctgcgtctgccggcgcaggtgcgccagcgttatgac
atttcgtccttgcgcttcatcgcctctaccggctcgccgtgtgcgcctgaagtgaaaaaa
gccatgatcgagtggatgggccccatcatccacgaaacctatgcctccagcgaggccggc
ctggtcaccttcatgcatgcccaggatgcgctgagccgtccgggcagcgccgggcggccg
ctgctcgaggccaaggtgaggatcctggacaaggcgcgtcagcccgtgcccgtgggcgag
gtggggctgatctacgtacgccagcctgcctatgccgatttcacctatcggggcaacgag
gctgcccggcgggccatcgccttcgatgatctgatcaccctgggagatatggggtatctc
gacgaggaaggtttcctgtatgtctgtgaccgcgactccgatctggtgatttccggcggg
gtcaacatctacccggcagagatcgagaacgagttgctcaagcatccccaggtatcggat
tgtgcggtgatcggcgtgccggaccccgaatacggcgaaaagctgttggcgctggtagag
acggcgggcgagccggacgaattgcaaaaggcgctgccgcaatggttgaagggcaggctg
gccgcctacaagctgccgcgcggtttcgtgttccagaccttgccgcgggacgacaacgga
aaaatcgcaaaaagaaagctgcgcgacgcctattggggatcgtcgcagcgcaaggtgtga
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