Bacillus tropicus: FJR70_00750
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Entry
FJR70_00750 CDS
T06661
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
btro
Bacillus tropicus
Pathway
btro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR70_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btro03019
]
FJR70_00750
Messenger RNA biogenesis [BR:
btro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FJR70_00750
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
ODP
pre-PUA_NIP7
Motif
Other DBs
NCBI-ProteinID:
QDF21655
LinkDB
All DBs
Position
143891..145564
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AA seq
557 aa
AA seq
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MNTLKNNVSIIALGGVNEIGKNMYVIQSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ
ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATKLTLGLIEIKLKEHNLQDDTELIV
IHSESEIDFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFKFDLTPVNNQHPDIHK
MARIGSEGVLALISESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ
IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEANEVNRLDPKQVAILCTGS
QGEPMAALARLASGNYRQVDVLPEDTVIIAATPIPGNERNVSRIIDNLFALGAKVIYGSG
SSTGVHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN
GDVVDISNELAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKVDG
DIISGPDIISRGFVYVRDSEVFLKELNKLAVITINNVKKEKVNSWGILKREVREALGKYI
YTNTKRKPMILPIIIEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacattaaaaaacaacgtgtctattattgctttaggtggagtaaatgaaataggg
aaaaatatgtatgttattcaatctgaaaatgatattgtcgttattgactgtggatcaaaa
tttccagatgaaagtttattaggaattgatttaatcattccagatgtcacatacttgcaa
gaaaataaagaaaaaattcgcggattagtagtgacgcatggacatgaagaccatattggt
ggaataccatattttttaaaacaactaaacgtaccaatctatgctacgaagttaacgtta
ggtttaattgaaattaaattaaaggaacataaccttcaagatgatacagaattaatcgtt
attcattcagaatcagaaattgattttggtgctattaagacaactttttttaaaacgaat
catagtattccagattgcctcggtatcgtttttcatacaccagaaggtactatagtacat
acaggtgattttaaatttgatttaacaccagttaataatcaacatcctgatattcataaa
atggctagaataggtagtgaaggtgtattagctttaatatctgaaagtacaaatgcagaa
cgacctggctttaccccatcagaaaggtcggtaggggaacggatagaggaaatatttatg
aaagcaaataggaaagtgattatttctacttttgcttctaatgtgaatcgtgttcagcaa
atagttgaagcttgtataaaaacaaatcgaaaactggctttgctcgggagaagtatggta
aatgtagtagaagttgctctagagaaagggtatctaaatattccagatggtatgttaatt
gaagcaaatgaggtaaatcgtttagatccaaagcaggtagcaatcctttgtacaggaagc
caaggagaaccaatggcagctttagcgcgtttagctagtggaaactataggcaagtggat
gttttaccagaagatacggttattatagccgcaactcctattccaggaaatgaacgtaac
gtttcacgaattatagataatttatttgcattaggagcaaaagtaatttacggatcaggt
agttcgactggagtccatgtatctggtcatgcgtaccaagaagaattaaagttaatgctc
actttaatgaagccaaaatattttatcccaattcatggagagtttagaatgctacatcac
catagtttgttagcagaatcaattggagttgaaaaagagaatatctttatcgttcgtaat
ggagatgttgtagatataagtaatgaactggcgattcaatctagaaaaatacaggcagga
aatatatacgtagatggattaggaattggtgatgttggaaatgcattattacgtgatcga
aaacaactttcagaagatggaatgctcgttatagttattacttttaataaagtggatgga
gatataatttcaggtcctgatattatatctcgtggatttgtctatgttcgtgattcagaa
gtatttttgaaggaattaaataaattagctgttattacgattaataatgtaaaaaaagag
aaagtgaatagctggggtattttgaaaagagaagtaagagaagctttagggaagtatata
tatacgaatacgaaaagaaagccgatgattcttcctataataatagaggtgtaa
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