Bacillus tropicus: FJR70_06925
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Entry
FJR70_06925 CDS
T06661
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btro
Bacillus tropicus
Pathway
btro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR70_06925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btro03019
]
FJR70_06925
03009 Ribosome biogenesis [BR:
btro03009
]
FJR70_06925
Enzymes [BR:
btro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FJR70_06925
Messenger RNA biogenesis [BR:
btro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FJR70_06925
Ribosome biogenesis [BR:
btro03009
]
Prokaryotic type
rRNA helicases
FJR70_06925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QDF22771
LinkDB
All DBs
Position
complement(1334065..1335429)
Genome browser
AA seq
454 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFV
LPILEKIDPVSSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLTTIVLDEADQMLYFGFLYDIEDILDETPGSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQREIIEQPKIKRVDENGKPVPKPAPKKSGEYRQRDSREGSRSESRRGSRNGSR
SDSRNSSRNENNRSFNKPSNKKGSTKQGQQRRGR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacttttaatcatacatta
cgtgaaaatggaattacagaagcaacaccgattcaggagaaagcaatccctgttatactg
tcaggtaaagatatcattggtcaagcaaaaactggaacaggtaaaacccttgcattcgtt
ttaccaattttagaaaaaattgatccagtatctagtgatgttcaagctttaattgttgca
ccaacaagggaactagccctgcaaattacaactgaaattaaaaaaatgcttgttcaaaga
gaagatattaatgtactagcgatttatggtgggcaagatgtagcacaacaattaagaaaa
ttaaaaggtaatacacatattgttgttgcaacaccaggacgattattagatcatatacga
cgtgaaacaattgatttgagtaatcttacaacgattgtactagatgaagcggatcaaatg
ctttatttcggtttcttatatgatattgaagatattttagatgagacacctggtagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaagttggccaagcgttat
atggatgaaccgcaaatgattcaagtacaaagtgaagaagtaacggtaaatacaattgag
cagcgtgtcattgagacgacagatcgtgcaaaaccagatgcacttcgttttgttatggat
cgtgatcagccatttttagcagttattttctgtcgtacaaaggttagagcaagtaagctg
tatgataatttaaaaggactaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagctaagattcagtacttaatcgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcacgtatttaactatgat
atccctgaagatgtagagagttatattcaccgcattggccgaacaggacgtgcaggtgga
tcaggtcttgcaattacgtttgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccaatacaaagagaaataatcgaacaaccaaagataaaacgtgta
gatgaaaatggaaaaccggtaccaaagccggctccgaagaaatcaggcgaatatcgtcaa
agagatagccgtgaaggttcaagaagtgaatcaagacgtggttcgagaaatggctcaaga
agtgattcaagaaatagttcaagaaatgaaaacaaccgatcatttaataagccaagtaat
aaaaaaggtagtacaaagcaaggtcagcaaagacgtggccgttaa
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