Bacillus tropicus: FJR70_12260
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Entry
FJR70_12260 CDS
T06661
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
btro
Bacillus tropicus
Pathway
btro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR70_12260 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btro03019
]
FJR70_12260 (rny)
Messenger RNA biogenesis [BR:
btro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FJR70_12260 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4407
KH_2
Golgin_A5
DUF2844
Motif
Other DBs
NCBI-ProteinID:
QDF23748
LinkDB
All DBs
Position
complement(2345279..2346841)
Genome browser
AA seq
520 aa
AA seq
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MTSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEARRILDEANRDAEALKKEALL
EAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEESLV
ARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV
RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtacagtttggatactcatctccattttgcttgcaacagtcggtgcagttgtt
ggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcggctaatgaagcg
agacgtattttagacgaagcgaatcgtgatgctgaagcacttaagaaagaagcgctttta
gaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgaccgt
agaagcgaattacaaaaacaagaaaatcgtttaatgcaaaaagaagagaaccttgatcgt
aaagacgaaacgctcgataaacgcgagcaacagttagagaagaaagaggaatctcttgta
gcgagacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaagcaa
caaacagaattagagcgcatttccaatctaacacgcgaacaagcgaaagcaattattctt
ggtaaagtagaaagtgaagtttctcatgaaatcgctgttatggtaaaagaaagtgaagtt
cgcgcgaaagaagaagcggataagaaagcaaaagagattttatctcttgcaatgcaaaga
tgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaatgacgaa
atgaagggacgtattatcgggcgtgaaggtcgtaatattcgtacgttagaaacgttaacg
ggtattgacttaattatcgatgatacaccagaggcggtaatcctttctggattcgaccca
attcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgcattcac
ccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatattcgc
gaagtcggggagcaaacaacgtttgaagtgggtgttcacggattacacccagatttaatt
aaaattttaggtcgtttaaaataccgtacaagttatggtcaaaacgtcttaaaacactct
atggaagttgcatatttaactggacttatggcagcagagcttggcgaggatgaaaaacta
gcaagacgtgctggtctattacatgatatcgggaaagcgattgaccatgaagtagaaggt
agccacgttgaaattggtgttgaactcgcaacgaaatataaagagcatcctgtagttata
aacagtatcgcatctcaccatggtgacacagaaccaacttctatcattgcagttttagtt
gcagcagcagatgctttatcagctgcaagaccgggagctcgtagtgaaacacttgaaaac
tatattcgtcgtcttgaaaagttagaagagatttcagagtcttatgaaggcgttgaaaaa
tcatttgcaattcaagcaggacgtgaagttcgtattttggtaaaaccagatacaatcgat
gatttagaagctcatcgtttagctcgtgatatccgaaaacgtattgaaaatgaactggat
tacccaggacatattaaagtaactgttattcgtgaaacacgtgcagtggaatacgcaaaa
taa
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