Bacillus tropicus: FJR70_15250
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Entry
FJR70_15250 CDS
T06661
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
btro
Bacillus tropicus
Pathway
btro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
btro00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FJR70_15250 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btro03021
]
FJR70_15250 (rpoD)
Transcription machinery [BR:
btro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FJR70_15250 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF2408
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QDF24308
LinkDB
All DBs
Position
complement(2874363..2875490)
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AA seq
375 aa
AA seq
DB search
MADKPARSKQIETEMTLEQVKEQLTELGKKRGVLTYEEIAERMNGFEIESDQMDEYYEYL
GEQGIDLVGDNDNDEGPNNRQIAKSEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLS
AEEEIRLATRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PSPEEIGEEMDLAPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPADHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaaccagctcgttctaaacaaattgaaactgaaatgacccttgagcaagtg
aaagaacaactcactgagctcggaaaaaaacgtggcgttcttacatatgaagagattgca
gaacgcatgaatggatttgaaattgaatccgatcaaatggatgaatactatgaatattta
ggtgaacaagggattgacttagttggcgacaatgacaacgacgaaggccctaataatcgc
caaatagcaaaatcggaagaagaattcgacctcaatgatttaagtgtaccaccaggggtt
aaaatcaacgatcctgttcgtatgtatttaaaagaaattggtcgtgtagatttactatct
gcagaagaagaaattcgacttgcaacgcgtattgaagaaggcgatgaagaagcgaaacgt
cgtcttgcagaagcaaacttacgtcttgtagtaagtattgcaaagcgctacgtgggccgt
ggtatgcttttcttagacttaatccaagaagggaatatgggtctaattaaagcggttgaa
aagttcgattatcgtaaaggtttcaaatttagtacgtatgcaacttggtggattcgccaa
gcaattacacgtgcgattgcagaccaagcaagaacaattcgtatcccagttcatatggtt
gagacgattaataagttaattcgtgtacaacgtcaattattacaagatttagggcgtgaa
ccatctcctgaagagattggtgaagaaatggatcttgctccagaaaaagtacgtgaaatc
ttgaaaattgcacaggagccagtttctcttgaaacaccgattggtgaagaagatgactcc
catttaggtgatttcattgaagaccaagaagcaacatcgcctgcggaccatgcagcgtat
gaattgctaaaagaacaattagaagatgtgttagatacactaacagatcgtgaagaaaat
gttctacgtcttcgttttggtttagatgatggacgaactcgtacgcttgaagaagttggg
aaagtattcggcgtaacgagagaacgtatccgtcaaattgaagcaaaagcacttcgtaaa
ttgagacatccaagccgtagtaagcgtcttaaggatttcttagaatag
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