Bacillus tropicus: FJR70_22265
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Entry
FJR70_22265 CDS
T06661
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
btro
Bacillus tropicus
Pathway
btro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FJR70_22265 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btro03021
]
FJR70_22265 (rpoC)
03400 DNA repair and recombination proteins [BR:
btro03400
]
FJR70_22265 (rpoC)
Enzymes [BR:
btro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FJR70_22265 (rpoC)
Transcription machinery [BR:
btro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FJR70_22265 (rpoC)
DNA repair and recombination proteins [BR:
btro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FJR70_22265 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QDF25569
LinkDB
All DBs
Position
4180026..4183637
Genome browser
AA seq
1203 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEALLAYQNGYVHLHTRVAVA
ASAVNNATFTEEQKSMLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAKYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFKITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVIPGQKISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVY
VEQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaacaattaactatcgtacgttaaag
cctgaaaaagacggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcgaaagtacgtcgtgaacgtatgggtcatatcgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcaattaaaaagctattacaa
gacatcgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaactctgga
aatgagccatcttggatgatcttagatgttctaccagtaatcccaccagaactacgccca
atggtacagttagatggtggacgttttgctacttctgacttaaacgacttataccgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacttaggtgcaccaagcattatc
gttcaaaacgaaaaacgtatgttacaagaagctgtagacgcgttaatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattaaaatcactatctcacatgctt
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactactctggt
cgttctgtaatcgttgtaggaccgaacttaaagatgtatcaatgtggattaccgaaagag
atggcgcttgaactgttcaaacctttcgtaatgaaagagttagttgaaaaaggattagca
cacaacattaagagtgcgaaacgaaaaatcgagcgtgtacaacctgaagtttgggacgtt
ttagaatctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtattcaggcatttgaacctacattagtagaaggtcgcgcaatccgtcttcaccca
cttgtatgtactgcatataacgcggactttgacggtgaccaaatggccgttcacgtacct
ttatcatcagaagcacaagcagaagctcgtcttcttatgttagcggcacaaaacatcttg
aacccgaaagacggtaaaccagttgttactccatctcaggatatggtattaggtaactac
tacttaacgcttgagcgtgaaggcgcaatcggtgaaggtatggtattcaaagatgcgaac
gaagcattgcttgcataccaaaatggatatgtacatcttcatacacgtgttgcagtagct
gcaagcgcagtaaacaacgcaacatttactgaagagcagaagagtatgcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccaactaattcaaaccttgaaaaagaaacaccagcgaaatatttcgttgaaaaaggtgcg
aacattaaagagattattgctagtcgcgaagaagtggcgccattcagcaagaaaatcctt
ggtaacatcattgcggaagtgtttaaacgtttcaaaattacagaaacgtctcgcatgctt
gaccgtatgaaaaacttaggattcaagtactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggtgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaagtccttg
aataaacgcaacccaatcttcatgatgagtgattccggtgcccgtggtaacgcatcgaac
tttactcagcttgctggtatgcgtggtctgatggccaatccatctggtcgtatcatcgaa
cttccaatcaaatcaagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgcgcgtaaaggtcttgccgatacagcactgaaaactgccgattctggttactta
acacgtcgtcttgttgacgttgcacaagatgtaatcgttcgtgaagatgattgtggaaca
gatcgcggtttattaattggtgcgattaaagagggtaatgaagttattgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttgctgaaaatcaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaacattcgttcagcgtttacgtgtaacactcgccatggtgtatgtaag
aagtgttacggtcgtaacttagcaactggaacagacgtagaagtaggggaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacgttccat
acaggtggggttgccggagatgatatcactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggctgttatcagtgaaatcgacggtgttatcgcagcg
atcaacgatgttaaagatcgccaagaagtagttgtacagggtgaagttgaagctcgtacg
tatgctattccttacggtgctcgtctgaaagtaattccaggacagaaaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattacg
gcagttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaagtaatggtacgccaaatgttacgtaaagttcgtgtaagt
gatgcaggtgaaacagatgtattaccaggaacattactagatatccatcagtttactgat
gcgaatgcgaaggtgttactgcaaggtaaacaaccagcaacagctagacctgttctactt
ggtattacaaaagcttcgcttgaaacagattcattcttatctgcagcatcgttccaagaa
acaactcgtgtcttaactgatgcagcgattaagggtaaacgcgatgagcttctaggattg
aaagaaaatgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgttaaaacaacacaagatgacatgaatgtagaaaacgatgaagtttat
gtggaacagtaa
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integrated database retrieval system
