Bacillus tropicus: FJR70_23035
Help
Entry
FJR70_23035 CDS
T06661
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btro
Bacillus tropicus
Pathway
btro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR70_23035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btro03019
]
FJR70_23035
03009 Ribosome biogenesis [BR:
btro03009
]
FJR70_23035
Enzymes [BR:
btro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FJR70_23035
Messenger RNA biogenesis [BR:
btro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FJR70_23035
Ribosome biogenesis [BR:
btro03009
]
Prokaryotic type
rRNA helicases
FJR70_23035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QDF25702
LinkDB
All DBs
Position
4312779..4314368
Genome browser
AA seq
529 aa
AA seq
DB search
MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTNKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDGRGGGDGRNRDRNR
DGRNRDGNRDRNREGSRDGNRGRRGEGQGRPGSSNGRGERKHHSRKPQA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgagtctttactgcaatctgttgaaagtatg
ggctttgaagaggctacgccaattcaagctgaaacaattccacatgcattgcaaggtaaa
gatattattgggcaagcacaaacaggtacagggaaaacggcagcattcggattaccacta
ttagacaaagtggatacaaataaagaatcggttcaaggtattgttatcgcgccaacgcgt
gaattagcaatccaagttggagaagagctatacaaaattggtaaacataaacgcgttcgt
attttaccaatctatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcttacaaaacgtagagacagttgttcttgacgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcaattttaacagatgtgccagaaacacatcaaacattacta
ttctcagcaacaatgccagatccaatccgtcgtattgctgagcgtttcatgactgaacct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtattaacacgcttattagatattcaatctcca
gaacttgcgattgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgctgcagaaggtatccatggtgatttaactcaggcgaaacgtatg
tctgtactacgtaaattcaaagaaggttctatcgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggtgtaacacacgtatacaacttcgatattccacaagat
ccagaatcatatgttcaccgtatcggtcgtactggtcgtgcaggtaaaaaaggtattgca
atgctatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaaatggaccgcatggatgcaccgacacttgacgaggcattagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacaattgaaaatgaaaacttagcatactacaagcgt
attgcagaagaaatgttagaagagaacgactctgtaacagtagtagctgctgctttaaaa
atgatgactaaagagccggatacaactccaatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggttctaaaaaacgcggtggtaacggaggcggataccgtgatggtaac
cgtaatcgtagccgtgatggacgcggcggtggcgatggtcgtaaccgtgatcgcaatcgt
gatggacgtaatcgtgacggtaaccgtgatcgcaatcgtgaaggtagccgtgatggtaac
cgcggtcgtcgtggagaaggtcaaggtcgcccaggatcttcaaacggacgcggcgaaaga
aaacatcatagccgtaagccacaagcttaa
DBGET
integrated database retrieval system
