Bacillus tropicus: FJR70_23665
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Entry
FJR70_23665 CDS
T06661
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
btro
Bacillus tropicus
Brite
KEGG Orthology (KO) [BR:
btro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btro03009
]
FJR70_23665 (rlmD)
Enzymes [BR:
btro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FJR70_23665 (rlmD)
Ribosome biogenesis [BR:
btro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FJR70_23665 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_11
MTS
PrmA
Methyltransf_15
Cons_hypoth95
Methyltransf_23
N6_N4_Mtase
DOT1
TPMT
Methyltransf_32
RrnaAD
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QDF25787
LinkDB
All DBs
Position
4442067..4443467
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AA seq
466 aa
AA seq
DB search
MKKRGRKMSTKMTPPVEKNEFIDVVFEDLTHDGAGVAKVKGYPIFVKNGLPGEEAQIKII
KVKKNFAFGRLMKLHTESPYRKDAECPVYNQCGGCQLQHLTYEGQLQAKEKQVRDVMQRI
GGLGDVPVHPVLGMKNPWVYRNKAQVPIGEREGGLVAGFYRQGTHDIINMESCLIQAEEN
DTLIQEVKRICEKHGISAYNEERNKGTLRHVMARYGQVTGEIMLVFITRTAELPNKKAII
EEIATKFPEVKSIVQNVNPKRTNVIFGDETTVLYGSEYIYDFIGDIKFAISARSFYQVNP
AQTKVLYDKTLEYAKLDGNETVIDAYCGIGSISLFLAQKAKKVYGVEIVPEAIEDANRNA
ALNNMTNAEFGVGEAEVVIPKWYKEGVIADTMVVDPPRKGCDEALLNTIIDMKPKRVVYV
SCNPATLARDLKVLEEGGYKTQEVQPVDMFPHTTHVECVAWLSLDI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagaggtcggaaaatgagtacaaaaatgacgccaccagttgaaaaaaacgag
tttatagatgtagtatttgaagatttaacacatgatggtgccggtgttgcgaaagtaaaa
ggatatcctattttcgttaaaaacggattaccaggtgaagaagcgcaaattaaaattatt
aaagtgaagaaaaacttcgcattcggtcgtttaatgaagcttcatacagagagcccatat
cgtaaagatgcagaatgcccagtgtacaatcagtgcggcggttgtcagcttcagcattta
acatatgaaggacaattacaagcgaaagaaaaacaagtacgtgacgttatgcagcgtatt
ggcggattaggtgatgttcctgttcatcctgtacttggcatgaaaaacccttgggtatac
cgtaataaagcacaagtaccaatcggagaacgtgaaggcggacttgtagctggtttctat
cgtcaaggaacgcatgacatcattaatatggaatcatgtttaattcaagcggaagaaaac
gatacattaatccaagaagtaaaacgtatttgtgaaaagcacggtatttcggcgtacaac
gaagagcgtaacaaaggaacacttcgccacgtaatggctcgttacggacaagtaacaggg
gaaattatgcttgtcttcattactcgtacagcagaattaccaaataaaaaagcaatcatt
gaagaaattgctacgaaattcccagaagtaaaatcaattgttcaaaacgtaaacccgaaa
cgtacaaacgtcattttcggagacgaaacaacagtactgtacggatcagaatatatttat
gattttattggcgacattaaatttgcgatttcagcacgttcattctatcaagtaaaccca
gcacaaacgaaagtgttatacgataaaacgttagaatacgcaaaattagatggcaacgaa
acagtaattgatgcctattgcggaattggatcaatctccttattcctagcacaaaaagcg
aaaaaagtgtacggcgttgaaatcgtcccagaagcaattgaagacgcaaatcgtaacgca
gcactaaacaatatgacaaacgctgaatttggcgtaggagaagcagaagtagttattcca
aaatggtacaaagaaggcgtaatcgctgacacaatggtcgtagatccaccgcgtaaaggc
tgtgatgaagcattactaaatacaatcatcgatatgaaaccaaaacgcgtcgtatacgta
tcatgtaacccagcaacattagcacgtgacttaaaagtactagaagaaggcggatataaa
acgcaggaagtacaacctgttgatatgttcccgcatacgactcatgtggagtgtgtggct
tggctaagccttgatatatag
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