Kyrpidia tusciae: Btus_0146
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Entry
Btus_0146 CDS
T01220
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bts
Kyrpidia tusciae
Pathway
bts03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bts00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Btus_0146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bts03021
]
Btus_0146
03400 DNA repair and recombination proteins [BR:
bts03400
]
Btus_0146
Enzymes [BR:
bts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Btus_0146
Transcription machinery [BR:
bts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Btus_0146
DNA repair and recombination proteins [BR:
bts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Btus_0146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ADG04924
UniProt:
D5WRR3
LinkDB
All DBs
Position
144611..148261
Genome browser
AA seq
1216 aa
AA seq
DB search
MLDVNNFEFMKIGLASPEKIRSWSHGEVKKPETINYRTLKPEKEGLFCEKIFGPTRDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYAFEAGMGAEAIKKLLQ
EIDLDKEAEQLKEELRTAQGQRRNRAIKRLEVVEAFRQSGNRPEWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKE
MALELFKPFVMKELVSQGLAHNIKSAKRKVERVSPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAHNIL
NPKDGKPVVTPTQDMVLGSYYLTIEKEGGKGEGRIFADPNEAIAAYERGIVGLHSRIALP
AASLNKTSLTAAQQRALLITTVGKLIFNEIFPADFPYINTGSMENLLKGTPDRYFIFEKG
ADVSARIRDLNVADSQAVVKGYLGSIIADCFRRYGTTETAVILDRIKKLGFHYSTKAGIT
ISVADITVPEEKEEILAEAEKNVQVVQNQYRRGLITEDERYGRVISIWGKAKDDLTDVLM
RSLDHFNPIYMMANSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYF
ISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFEVDEIRDGREVIE
DLFDRINGRVAFQNVHHPETGEVIVHRNELIDEDKARAIVEAGIRKVVIRTVLTCRTKHG
VCVRCYGRNLATGKMVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQ
ELFEARNPRGQAVITEIDGTVADIRDGKDKREIEIAGEKETKVYAVPYGSRIRVIVGQMV
EAGDELIEGSVDPKDMLRVKGLKGVQNYLLREVQRVYRLQGVDINDKHVEVMIRQMLRKV
RIVDSGDTDLLPGTYVDLRDYEEANRQAFASGLEPAIARPALLGITKASLETDSFLSAAS
FQETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMARYRGLTLEEEALPEPAVEDE
ENPGWEEDVEAETVTE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgtcaacaacttcgagttcatgaagatcggcctggcatcgccggaaaagatt
cgctcgtggtcgcacggtgaagtcaaaaaacccgagacgatcaattaccgcacgttgaaa
ccggaaaaagagggtctcttttgcgagaaaattttcggccccacccgggattgggagtgc
cactgtggcaaatacaaacgggttcgatacaaaggggtggtctgcgaccgctgcggtgtg
gaagtcacccgggcgaaagtccggcgggagcggatgggacatatcgaactggcggcgccg
gtctcgcatatttggtattttaaagggatccccagccgcatgggcttggtattggatatg
tcccccagggccttggaggaggtgatttattttgcctcctatgtcgtgaccgatcccgga
gacacgcctcttgagaaaaaacaacttctttcggaaaaggagtaccgcagctatcgggag
aaatacgggtatgcctttgaggcggggatgggcgcagaagcgatcaaaaagcttctccaa
gagatcgatttggacaaagaagcggagcagctcaaagaagagcttcgcaccgcccaaggc
cagcgccgaaaccgggccatcaagcgcctggaggtggtggaggccttccgccagtccggc
aatcgcccggagtggatgatcctcgacgtattgccggtcattccgccggaattgcgccca
atggtacaactggacgggggaagatttgcaacgtctgatttgaacgatctgtaccggcgg
gtgatcaaccggaacaaccggctcaagcggctcctggacctgggtgctccagacattatc
gttcaaaacgaaaaacggatgcttcaggaagcggtggacgccctcatcgacaatgggcgc
cggggtcggccggtgaccgggccggggaatcgaccgctgaaatccctctcccatatgctg
aaagggaagcaggggcggttccggcagaatctcctcggcaagcgcgtcgattattccggg
cgctcggtgatcgtggtgggcccagagttgaagatgtaccaatgcggtctgcccaaggag
atggccctggagctgttcaaaccttttgtgatgaaagaactggtgagtcaggggctggcc
cacaatatcaagagtgcgaaacggaaagtggagcgcgtctctcccgaggtgtgggatgtg
ctggaggacgttatccgggagcatcccgtcctgttgaaccgcgcgcccaccttgcatcgc
ctgggcattcaagcctttgaacccgtattggtggaggggcgggccatcaagctccacccg
ctggtgtgcaccgcgtacaacgccgactttgacggggaccaaatggccgtccacgtgccg
ctttcggcggaagcccaagccgaggcgagaattttgatgttggcggcccacaacatttta
aacccgaaagacgggaagccagtggtcacgccaacccaggatatggttctgggaagttat
tacctgaccattgaaaaggagggcgggaaaggcgaagggcggattttcgccgatcccaat
gaggcgatcgccgcctatgagcgggggatcgttggattgcacagccgcattgccctgccg
gccgcttctctcaacaagacgtcattgaccgcggctcaacagcgcgctctcttgattacg
acggtggggaagctgatctttaatgagattttcccggcggactttccgtacatcaatacc
gggagtatggaaaatctgctcaaggggactccagatcgctactttattttcgaaaaaggc
gcggatgtgtcggcccgaattcgcgacttgaatgtggccgattcccaagcagttgtaaag
ggctatctcggttcgatcatcgccgattgtttccggagatacgggaccacggagaccgcc
gtgatcttggaccgcatcaagaaactcggatttcactattccaccaaggcgggtattacc
atctccgtggcggacatcaccgttcccgaggagaaggaagagattctcgccgaggctgaa
aagaacgtgcaggtggtgcagaatcagtaccgccggggcctgatcaccgaggatgaacgg
tacggacgggtgatctccatctgggggaaggccaaagacgatctgaccgacgtcctgatg
cgctctttggatcactttaacccgatctatatgatggccaactccggtgcacggggtaac
gtgtcccagattacgcaattggccgggatgcgcgggctgatggccaatccctcgggcagg
atcatcgagctgccgattaaatcgaacttccgggaaggtctaacggtgttggagtatttt
atttctactcacggagctcggaaaggtctcgcggacacagccctgcggacggcagactcg
gggtatttgacccggcgcctggtggacgtcgcccaagatgtcatcgttcgagaggaagac
tgcggcaccgacaaggggtttgaagtggatgagattcgggatggtcgggaagtcatcgaa
gacctgttcgatcggatcaatgggcgagtggcgtttcagaatgtccatcatcctgagacc
ggcgaggtcatcgtccatcgcaacgagctgatcgatgaagacaaagcgcgggccattgtt
gaagcgggcatccggaaggtcgtcattcggacggtcctgacctgccgcacgaaacatggg
gtgtgtgtgcggtgttacggccggaatctcgccacgggcaagatggtggagatcggcgag
gcggtgggaatcatcgcggcccagtccatcggggagccgggcacccagttgacgatgcgg
acgttccacaccggcggcgtggccggggacgatatcactcaggggttgcctcgcgtccag
gagctttttgaagcgaggaatccccggggccaggcggtgatcaccgagattgatgggacc
gtggccgacatccgggacggcaaagataaacgggagatcgagatcgcgggcgaaaaggaa
acgaaggtgtacgcggtcccctatggttcccggatccgggtgatcgtgggtcaaatggtg
gaggccggggacgagttgatcgaagggtctgtcgatcccaaggatatgctccgggtcaaa
ggactgaagggggtccagaattaccttctccgggaagtccagcgcgtctaccggcttcag
ggggtagacatcaatgacaagcatgtcgaggttatgattcgccagatgttgcgcaaggtt
cgaatcgtggatagcggggataccgatctgcttccggggacttacgtggatctccgggat
tacgaggaagcgaaccgccaggcctttgccagcggcctcgaaccggcaattgctcgcccg
gctctcctcgggatcaccaaggcttctctggagaccgattcgttcttgtcggcggcgtca
ttccaagagacgacccgggtcctcaccgatgcggcgatcaaaggaaaggtcgaccggctg
cttgggttgaaggaaaatgtgatcatcgggaagttggtcccggcggggacgggaatggcg
cgctaccggggcttgacattggaggaggaggcactgccggagccggcggtggaagatgaa
gaaaaccccggctgggaagaggacgtcgaggcggaaaccgtcacggaataa
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integrated database retrieval system
