Kyrpidia tusciae: Btus_1603
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Entry
Btus_1603 CDS
T01220
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bts
Kyrpidia tusciae
Pathway
bts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Btus_1603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bts03019
]
Btus_1603
03009 Ribosome biogenesis [BR:
bts03009
]
Btus_1603
Enzymes [BR:
bts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Btus_1603
Messenger RNA biogenesis [BR:
bts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Btus_1603
Ribosome biogenesis [BR:
bts03009
]
Prokaryotic type
rRNA helicases
Btus_1603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADG06313
UniProt:
D5WPQ4
LinkDB
All DBs
Position
1615669..1617249
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AA seq
526 aa
AA seq
DB search
MTTFTDFQLSRRVQQAIDDMGFEEPSPIQAACIPLVLQGKDVIGQAQTGTGKTAAFGVPI
IEMMGTGRHVQALILTPTRELAIQVAGELRKIAKYARVRTLPIYGGQSIGHQIRALQQGV
GVVIGTPGRVLDHLRRGTLKLDKVRTVVLDEADEMLDMGFIEDIEAILKETPQERQTLLF
SATFPHEVKQLAVRYMKNPEHVTVNRGEMTVPLIDQIYYKVLERNKLESLCRIIDSEDVS
LGIIFCRTKRGVDELTEALLARGYLVDGLHGDLSQAQRDRVMKKFRNGDIEFLVATDVAA
RGIDVTNVTHVINYDIPQDPESYVHRIGRTGRAGRRGLAITLVTPREFKLLKQIERETQA
PLVGREVPTLADVAERVAENWRERLRRTVQEGGIANYRAILGSLLDEFDPVDLAAAALKL
ASADDLHTGEEEDYDFGETGASPGMVRFFLNIGRSANVGPGDLVRIISEETGIPGQAIGK
IDLYDRFAFVEVEEESAPFVFEALRQARINGLRVNLEPARPRSRRA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttactgattttcaattgagccgaagagtgcagcaagccattgatgatatg
ggattcgaggaaccctctccgattcaggcagcttgtattcctctggtgttgcaaggaaaa
gatgtcattggtcaagctcagacgggaacggggaaaactgcggccttcggggtgccgatt
attgagatgatgggtacgggtcggcacgttcaagccttgattctcactcctacccgggaa
ttggcgatccaggtggccggggagttgcgcaagatcgcgaagtatgccagggtgaggacg
ctcccgatttatggcgggcagtccattggtcaccagattcgggcgcttcagcagggcgtg
ggagtggtcattggaactcccgggcgggtgttggaccatttgcgccggggcaccttgaag
ttagacaaagtgcgcaccgtggttctggacgaagcggatgagatgttggatatggggttc
atcgaagatattgaggcgattttgaaggagacaccccaggaacgccagacgctcttgttt
tcggccacattcccccacgaagtgaagcagttggcagtccggtacatgaaaaacccggag
cacgtgacggtcaaccggggggaaatgaccgtccccctgatcgatcagatctactataaa
gtgctggaacgcaacaagctggaaagcttgtgccggatcatcgacagcgaggacgtgtcg
ctcggcatcattttttgccgcaccaagcgcggggtggatgagctgaccgaggcactgctg
gcccggggatatctcgtggacggacttcacggcgatttgtcccaggcccagcgggatcgg
gtgatgaaaaaattccgcaacggggatatcgagtttctggtggccacggatgtcgcggcc
cgggggatcgacgtgaccaatgtcacccacgtgattaactatgacattccccaggatcca
gaatcgtatgtgcatcggatcggccggacgggacgggccggtcggcggggactggccatt
accttggtcactcccagggagttcaagttgctgaaacagatcgagagggagacccaagct
cccttggtggggcgggaggtccccacgttggcggatgtggcggaacgggtggccgaaaac
tggcgggagcggttgcggcgcacggtccaggagggggggatcgccaattaccgcgccatt
ctcggctctctcctggatgagttcgatccggtggatctggccgccgctgctttaaagctg
gccagcgccgacgatctgcacacgggcgaggaggaggactacgattttggcgagaccggg
gcatcccctggcatggtccgctttttcctaaacattggacgcagcgccaatgtgggaccc
ggggatcttgtgcggataatttcggaggagacgggcatccccggtcaggcgatcggcaag
atcgacttgtacgatcggttcgccttcgtcgaagtggaggaggaatcggcaccctttgta
ttcgaggcgctgcgccaggcgcgcatcaatggacttcgggtcaacttggaaccggcgcgc
cctcgaagccgccgggcctga
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