Bacillus thuringiensis serovar kurstaki HD73: HD73_5461
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Entry
HD73_5461 CDS
T02460
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
btt
Bacillus thuringiensis serovar kurstaki HD73
Pathway
btt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HD73_5461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btt03019
]
HD73_5461
03016 Transfer RNA biogenesis [BR:
btt03016
]
HD73_5461
Enzymes [BR:
btt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HD73_5461
Messenger RNA biogenesis [BR:
btt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HD73_5461
Transfer RNA biogenesis [BR:
btt03016
]
Prokaryotic type
tRNA degradation factors
HD73_5461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
S1_RRP5
OB_PDCD11
OB_Dis3
DUF8447
Motif
Other DBs
NCBI-ProteinID:
AGE81038
LinkDB
All DBs
Position
complement(5220160..5222598)
Genome browser
AA seq
812 aa
AA seq
DB search
MEEIIQEHIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVTMEEKGLVIRT
RSNRYGLPEKMNLVRGKLIGHARGFAFVVPDEKKTGDDDLFIPPTELNGALHGDTVLARL
SSQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFILKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELIKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEVHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDADSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWREKLPEI
AEHSSNMERRAVEAERETDEMKKAEYMVDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEQHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSSERSNERGGERGTGRKFDRGGKGKGRGSASASAS
ASQPGKKDGNGKKKKAFFENVPGFKKKKKKRK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaatcatacaagaacatattgataagttgttattatttatgagagaagaagcg
tataaaccgctaacgatacaagagttagaagaggcatttgggattgaaggttctgagggc
tttaaagatttcgtaaaggcacttgtaacgatggaagaaaagggacttgttattcgtact
cgtagcaaccgttacggtcttcctgaaaagatgaatttagtaagaggtaagttaattgga
catgcacgtggttttgcattcgttgtaccagacgagaagaaaacgggagacgatgatctt
ttcatcccgcctacagaattaaacggtgcacttcatggcgatacagtattagcacgcctt
agttctcaatcgagcggttcgcgtcaagaaggttcaattgtacgcattttagagcgtgga
acgaaagaactagttggtacatatacagaatcgaaaaactttggattcgttatacctgac
aataagcgctggacgagtgatatctttatcttgaaaagcgcatcgatgggtgctgtagaa
ggtcataaagtagttgtgaaaattacgagctatccagagaatcgtttaagtgcagaaggt
gaagttattcaaattctaggtcataaaaatgatccaggagtagatattttatctgtcatt
cataaacatcatttacctttagcattccctgaggaagtgatggagcatgcaaacagtgta
ccagaaacgatttcagaagaagatttaaaagatcgccgcgacctgcgcgatcaaatgatc
gtaacgattgatggtgcagatgcgaaagacttagatgatgctgttacagtaacgaagctt
gagaacggtaactacaagctaggcgttcacattgcggatgtaagtcattacgttcaagaa
ggctctccaattgatgttgaagcagcggaaagagcgacgagtgtatatcttgttgaccgt
gtaatcccgatgattccgcatcgtctatctaacggtatttgttcattaaatccgaaagta
gaccgtctgacgttatcttgtgaaatggaaatcaacaacttaggtgatgttgttaaacac
gagattttccaaagtgtgattaaaacgacagagcgtatgacgtatgctgacgtaagaagc
attttagaagatgaggacgaagagttaattaagcgttatgagccgctcgtaccgatgttt
aaagagatgggtcaattggcacaaattttacgtgaaaaacgtatgcgccgtggtgcaatt
gactttgactttaaagaagcgaaagtattagtggatgaagaaggaaaaccgactgatgtt
gttatgcgtgatcgttctgtttcagagaagttaattgaagaatttatgcttgttgcgaat
gaaacagtagcagagcacttccactggatgaacgtaccgtttatgtaccgtgtccatgaa
gatccgaaagaagataagcttgagcgtttcttcgagtttgtaacgaacttcggatatgcg
gtaaaaggacgtgcgaatgaagtgcaccctcgtgcgctgcaacaaattcttgaaatggtt
caaggacagccagaagaagtagttatttcaacagttatgcttcgttctatgaagcaagct
cgttacgatgcggatagtttaggacatttcggtttatcaactgagttctacacacacttc
acatcaccaattcgtcgttacccagatacaatcgttcatagattaattcgtgaatacatt
attaatggtaaagtcgacaatgaaacgcaagcaaaatggcgtgaaaaattacctgagatt
gcagagcactcttctaatatggaacgccgtgctgttgaagcagagcgtgaaacagatgag
atgaaaaaagcagagtatatggttgataagatcggtgaagagtatgacggtatgattagt
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacac
gttagctacttaacggatgattactaccgttatgacgagcaacatttcgctatgatcgga
gaacgtacaggaaacgtattccgcatcggtgatgaaattacaattcgcgttattaacgta
aacaaagacgagcgtgcaatcgactttgaaatcgttggcatgaaaggcacacctcgccgt
aagttcaaagatcgtccagtcgttatcgaacagccaagaacaggcagaaagaaacgcggt
ggacgtagcgagcgcagtagcgagcgcagtaatgagcgcggcggtgaacgtggcacaggt
agaaaatttgaccgtggtggcaaaggaaaaggaagaggatctgcatctgcatccgcttct
gctagccagccaggaaaaaaagatggtaacggtaagaagaaaaaagcattcttcgaaaac
gtaccaggattcaagaagaaaaagaaaaagcgtaagtaa
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