Borrelia turicatae: BT0712
Help
Entry
BT0712 CDS
T00737
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
btu
Borrelia turicatae
Pathway
btu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
btu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BT0712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btu03021
]
BT0712
Transcription machinery [BR:
btu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT0712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AAX18028
UniProt:
A0ABF7PW39
LinkDB
All DBs
Position
752668..754560
Genome browser
AA seq
630 aa
AA seq
DB search
MNSVENKDLQIFKKKNSKIIKAILSHLGDKKAITFEDLSTFLSGDMLDPDNIDYIYGVLE
NEGISLVNEKMESDICDIDEFDEADKLDSQCMMLDDSIQSDDEIDDKLDEFDDEVLDKED
FSSGYIKSGLLKDSNSEDPIRLYLKEIGKEFLLTGNQEVELAKQMDSGESIIENILKNEG
LVIENYYNLVNAIYSRVDKEEFFKKEKEREKDNNFDYYNKKKRITSFYKASLKPFQDRLI
KYIERKHSLYELGEDIFEESITSERLHIKEMLKSVPLYQEELRIFSDDYIDSASKIKDLK
RQQKSILDRLKIDKVRNLRILGRDLAIPERRERIEKSLNIREDLIKEQITEAQLAQKELE
RIEMYYEYPMDKIISMSEEILKGKQMMQHAKDQLIKANLRLVVSIAKKYANRGLHFFDLV
QEGNIGLIKAVEKFEYKRGFKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINRLNR
ETRYLVQVLGKDPTDEELSSRLGWDLKKVKTVKNVSREPVSLETPIGEEEDSVLSDFIED
KAIKNPAKHTSFVVLQDQIRAVLGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTRE
RIRQIESKALRRLKNPKKTQKLKDYLEDLN
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtagaaaataaagacttgcagatttttaagaagaagaattcaaaaataata
aaggccatcttgagtcatttgggagacaaaaaggcaattacttttgaggatttatctacc
tttttatcaggagatatgttggatcctgacaatattgattatatttatggagtccttgag
aatgagggaataagcttggttaatgaaaagatggagtcagatatttgtgatattgatgaa
tttgatgaagcagataaacttgatagtcagtgtatgatgttagacgattctattcagagt
gatgatgaaattgatgataaattggatgaatttgatgatgaggttttggacaaagaagat
tttagttcaggatatattaagagtggtttattaaaagatagtaattctgaagatcctata
aggctttacttaaaggaaatagggaaagaatttttattgactgggaatcaagaggttgaa
cttgcaaaacagatggattctggtgagagcataattgagaatattcttaaaaatgaagga
ctggtcatagagaattattataatttagttaatgctatttattcaagagtagataaagaa
gagttttttaagaaagaaaaggaaagagaaaaagataataatttcgattattataacaaa
aaaaaaaggatcacttctttttataaagcttcattgaaaccatttcaggatcgtttaata
aaatatattgaaagaaaacatagcttatatgagcttggggaagatatttttgaagagagt
attactagtgagagacttcatataaaagaaatgcttaagtcggtacctttatatcaagaa
gagttgcgtattttttcagatgattacattgattctgctagtaaaataaaggatttgaag
aggcaacaaaagtccatattggatagattaaagatagataaggtacgcaatctgagaatt
ttggggagagacttagctattcctgagagacgggagaggatagaaaaatctttaaatatt
cgagaagatctaattaaagagcaaattacagaagctcaacttgctcaaaaagagcttgag
agaattgagatgtattatgaatatccaatggataagataataagcatgtcggaggaaatc
cttaagggcaagcagatgatgcagcatgcaaaagatcagttaattaaggctaacttaaga
cttgtggtaagtattgctaaaaagtatgctaatagagggttacatttctttgatcttgtt
caagagggcaatattggtttaattaaggcggttgaaaaatttgagtataagcgaggcttt
aagttttctacttatgctacatggtggattcgtcaagcaataacaagatcaatctcagat
caggcgcgtaccattcgtgttcctgttcatatgattgagcagataaataggttgaataga
gaaacaagatatttggttcaagtgttaggtaaagatccaacagacgaggagttgtcatct
agacttgggtgggatcttaaaaaagtaaagactgtaaagaatgtttcaagagagcccgtt
tcacttgaaacaccaattggagaagaagaagattctgttcttagtgattttattgaagat
aaggctataaaaaatccagcaaaacacacttcttttgtggtattgcaagatcaaataaga
gcagttcttggaactcttccagaaagagagcaggaagttgttaagatgagatttggtctt
gaagatggatattctttaactctggaagaagttggactgcattttaatgttacaagagag
agaattagacagattgagtctaaggctttaaggcgacttaaaaatcctaagaaaacccaa
aaacttaaagattatttagaagatttaaattga
DBGET
integrated database retrieval system
