Burkholderia thailandensis MSMB59: BTHA_1096
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Entry
BTHA_1096 CDS
T03416
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
btv
Burkholderia thailandensis MSMB59
Pathway
btv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTHA_1096 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btv03019
]
BTHA_1096 (pcnB)
Enzymes [BR:
btv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BTHA_1096 (pcnB)
Messenger RNA biogenesis [BR:
btv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BTHA_1096 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIS93908
LinkDB
All DBs
Position
1:complement(1185709..1187253)
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AA seq
514 aa
AA seq
DB search
MIKKLIRKLLGQDARTAQDAPPAPAGPIEAAPAAPSRAKSARGAAKKTRNGEPTIVHANA
HGIDPALISKNAIRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEVQRLF
RRARLIGRRFQIVHVQFGQELIEVSTFRALVDTPQEPPADAAPAKRLKRDELDRRTHAVD
ASGRVLRDNVWGEQHEDAARRDFTINAMYYDPASQTVLDYHDGMADMRARLLRMIGDPAT
RYREDPVRMLRVVRFAAKLGFDIEEKTREPIKELADLINNVPAARLFDEMLKLLLSGHAL
ACLKQLRKQGLHHGLLPLLDVVLEQPQGEKFVTLALNNTDARVRAGKPVSPGFLFATLLW
HDMRQRFEQYTADGEFPVPALHRAMDDVIDMQTEKLAIHKRYSADMREIWGLQLRLEKRS
GRSALRLLEHQRFRAGYDFLLLRCESGELDPGVGQWWTDFIDGDAATREALLTQGGSREK
SPRKRRRRSGRSRRTADGADSTEGAARGESDAND
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaaactcatccgcaagctgctcgggcaggacgcccgtacggcgcaagacgcg
ccgccggccccggccggcccgatcgaggccgcgcccgccgcgccgagccgcgcgaaatcc
gcgcgcggcgccgcgaagaaaacccgcaacggcgagccgaccatcgtgcacgcgaacgcg
cacgggatcgatcccgcgctcatctcgaaaaacgcgatccgcgtcaccgacacgctgcag
caagccggctttcgcgcgttcatcgtcggcggcgcggtgcgcgacctgctgctcggcatc
gcgccgaaggacttcgacgtcgcgaccgacgcgacgccgaccgaggtccagcgcctgttt
cgccgcgcgcggctgatcggccggcgcttccagatcgtccacgtgcagttcggccaggaa
ctgatcgaagtgtcgacgttccgcgcgctcgtcgacacgccgcaggagccgcccgccgac
gccgcgcccgcgaagcgcctgaagcgcgacgaactcgaccgccgcacgcacgcggtcgac
gcgagcggccgcgtgctgcgcgacaacgtgtggggcgagcagcacgaagacgcggcgcgc
cgcgacttcacgatcaacgcgatgtactacgatccggcgtcgcagacggtgctcgactac
cacgacgggatggccgacatgcgcgcgcgcctgttgcggatgatcggcgatccggcgacg
cgctaccgcgaggacccggtgcggatgctgcgcgtcgtgcgcttcgcggcgaagctcggc
ttcgacatcgaggagaagacgcgcgagccgatcaaggagctcgccgatctgatcaacaac
gtgccggccgcgcgcctgttcgacgaaatgctcaagctcctgctgtcgggccacgcgctc
gcatgcctgaagcagttgcgcaagcaggggctgcaccacgggctgctgccgctcctcgac
gtcgtgctcgaacagccgcagggcgagaagttcgtcacgctcgcgctgaacaacaccgac
gcgcgcgtgcgcgccggcaagccggtgtcgcccggcttcctgttcgcgacgctcctttgg
cacgacatgcgccagcgcttcgagcaatacacggccgacggcgaattcccggtgcccgcg
ctgcatcgcgcgatggacgacgtgatcgacatgcagaccgagaagctcgcgatccacaag
cgctattcggccgacatgcgcgagatctggggattgcagctgcgcctcgagaagcgcagc
ggccgcagcgcgctgcgcctcctggaacaccaaagattcagagcggggtatgatttcctc
ctgttacgctgcgaatccggcgagctcgatccgggcgtcggacagtggtggacggatttc
atcgacggcgatgccgcgacgcgcgaggcgctcctcacgcagggcggcagtcgcgagaag
tcgccgcgcaagcggcgccgccgcagcggacgcagccgccggacggccgacggcgccgac
agcacggaaggcgccgcgcgcggcgagtccgacgcgaacgactga
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