Burkholderia thailandensis MSMB59: BTHA_1492
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Entry
BTHA_1492 CDS
T03416
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
btv
Burkholderia thailandensis MSMB59
Pathway
btv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTHA_1492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btv03019
]
BTHA_1492
03009 Ribosome biogenesis [BR:
btv03009
]
BTHA_1492
Enzymes [BR:
btv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BTHA_1492
Messenger RNA biogenesis [BR:
btv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BTHA_1492
Ribosome biogenesis [BR:
btv03009
]
Prokaryotic type
rRNA processing factors
BTHA_1492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AIS94539
LinkDB
All DBs
Position
1:complement(1614111..1617344)
Genome browser
AA seq
1077 aa
AA seq
DB search
MKRMLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVVTRIEPSLEACFVNY
GEDRHGFLPFKEVARQYFKEGVDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQ
WDLNYLLQLWRAIEAASQSGHPGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTEIYDQ
ARAFMDIVMPDNVGKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALV
AIDVNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVE
QRLKDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSA
LQVLRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGVVLIPNKHLDT
PHYKLERLRHDDARLDDPRASWKMAEEAARELEAETGYSKRAEETKPRQEAAVKGITPER
PAPSPAPQRQSAPEAAAPVAAAPASGGFMKWLKGLFGVQPAAAPAPAPAAQEAAARPARE
RGERGEKAERGERGGDRNRNRRGGAAQQAGGRDQAAAGGGRGQAQRAEREGKETREPREG
REARGGRDNREGREAREAREAREARETREPREPREQREPREPREPREQREPRERAETADA
SEAPRGERRERGERRKPAQHVATLETVNRGESALAEAAEKPAYAPGAEAGVDADSNARDG
EERRRRRRGRRGGRREREDEGAAHAAEGGEGVTVEAFEHAEQAQQGVAPAAGHEPQHVAQ
AGAGAAAVAAAAIAADSAAHVESGAKVEPQPAAGAPVADTQRAEAAPARLVEAPAQAAST
AQAEVEQAAPATAAHVQPAAADVAHEPPAPAATAPAEAAPAEAPAAEASEVAAPAVAPAV
VAEPAPVAETQQPAAVAAAAPLAAPVAHEPAPVAETHVPAAARAEAATPASVSTAGASLD
TVLEAAGLVWVNTDTDKLRAAQAAAAQIVPPARVPRERKPLPPVDAAPMQQVETTHR
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctgttcaatgcgacgcagcaggaagaactgcgcgtcgccatcgtcgat
gggcagaagctcatcgacatcgacatcgaaaccgccggccgcgaacaacgcaaaggcaac
atctacaagggcgtcgtcacccgcatcgaaccgtcgctcgaagcctgcttcgtcaactac
ggcgaagaccgccacggcttcctgccgttcaaggaagtcgcccgccagtacttcaaggaa
ggcgtcgacatgcgctccgcgcgcatccaggacgcgttgcgcgaaggccaggagctgatc
gtccaggtcgagaaggaggagcgcggcaacaagggcgcggcgctcaccaccttcatctcg
ctcgccggccgctatctcgtgctgatgccgaacaacccgcgcggcggcggcgtgtcgcgc
cgcatcgagggcgacgagcgccaggaactgcgcgagacgatggcgcaactgcagatcccc
gacggcatgagcatgatcgcccgcacggcgggcatcggccgcagcgccgaggaactgcag
tgggacctgaactacctgctgcagctctggcgcgcgatcgaggcggcgtcgcaaagcggc
catcccggccagccgatgctgatctacctcgaatcgagcctcgtgatccgcgcgatccgg
gactatttccagcccgacatcggcgaaatcctgatcgacacgaccgagatctacgatcag
gcccgcgcgttcatggacatcgtgatgcccgacaacgtcggcaaggtgaagcgctatcac
gacgacgtccccctcttctcgcgcttccagatcgagcaccagatcgaaaccgcgtactcg
cgcacggtgccgctgccgtcgggcggcgcgatcgtgatcgaccacaccgaggcgctcgtc
gcgatcgacgtgaactcggcgcgcgcgaccaagggcgcggacatcgaggagacggcgacc
cgcacgaacctcgaggcggccgatgaagtggcgcgccagctgcgtctgcgcgacctcggc
ggcctgatcgtgatcgacttcatcgacatggagtcggccaagagccagcgcgaagtcgag
cagcgcctgaaggacgcgctcaagcacgaccgcgcgcgcgtgcagatgggcaagatctcg
cgcttcggcctgatggagctgtcgcgccagcgcctgcgcccggccctgtccgaaggcagc
cacgtcacctgcccgcgctgcaacggcacgggccacatccgcgacaccgaatcgtccgcg
ctgcaagtgctgcggatcattcaggaagaagcgatgaaggagaacaccgcggcgatccac
tgccaggtgcccgtcgaggtgacggccttcctgctcaacgaaaagcgccaggaaatcaac
aagatcgagtcgcgcttcaaggtcggcgtcgtgctgatcccgaacaagcacctcgatacg
ccgcactacaagctcgagcgcctgcgtcacgacgatgcgcgcctcgacgatccgcgcgca
tcgtggaagatggccgaggaagccgcccgcgagctcgaggcggaaaccggctacagcaag
cgcgccgaggaaacgaagccgcgccaggaagcggccgtcaagggcatcacgcccgagcgt
ccggcgccgagccccgcgccgcagcgccagagcgcgccggaagcggctgcgcccgtggcc
gccgcgcccgcgagcggcggtttcatgaagtggctgaagggcctgttcggcgtgcagccc
gccgcggcgcccgcaccggcgcccgccgcgcaggaagcggccgcgcgtccggcgcgcgag
cgtggcgaacgcggcgagaaggccgagcgcggcgaacgcggcggcgatcgcaaccgcaac
cgtcgcggcggcgccgcgcagcaagccggcggacgcgatcaggcagcggcaggcggcggc
cgcggtcaggcgcagcgcgccgagcgcgaaggcaaggaaacccgcgagccccgcgaaggc
cgcgaagcacgcggcggccgggacaaccgggaaggccgcgaagcacgcgaagcacgcgaa
gcacgcgaagcacgcgaaacccgcgaaccgcgcgaaccgcgcgaacaacgcgagccgcgc
gaaccccgtgagccgcgcgaacagcgcgaaccccgcgaacgcgccgaaacggccgacgcc
tcggaagcgccgcgcggcgagcgccgtgagcgcggtgagcgtcgcaagccggcccagcac
gtcgcgacgctcgaaaccgtgaaccgcggcgaaagcgcactcgcggaagccgctgaaaag
ccggcgtacgcgcctggcgcggaagccggcgtcgacgcggattcgaacgcgcgtgacggc
gaggaacgccgccgccgccgccgcggtcgccgtggcggccgccgcgagcgcgaggacgaa
ggcgcagcgcacgctgcggaaggcggcgaaggcgtgacggtcgaagcgttcgagcatgcc
gagcaagcgcagcaaggcgtcgcgcctgccgccggccacgagccgcagcatgtcgcgcaa
gcgggcgcgggtgcggcggcagtcgcggctgcggccatcgccgctgattctgccgcgcat
gtcgagagcggcgcgaaggtcgagccgcaaccggcagccggggcgcccgtcgccgacacg
cagcgtgccgaggcggcgcctgcgcgactggtcgaagcgccggcgcaagccgcttcgacg
gctcaagccgaagtcgagcaagccgctccggcaaccgcggcgcacgtacagccggctgcg
gccgatgtcgcgcacgagccccccgctccggccgcaaccgcccccgccgaagccgccccg
gccgaagcgcctgccgcggaagcgtccgaagtcgccgcacccgcggtcgctccggccgtg
gtcgcggagcctgcgccggtcgccgaaacgcagcagcccgctgctgtcgcggcggccgca
ccgctcgcagcgcctgtcgcgcacgagccggctcccgtcgccgagacgcacgtcccggcg
gccgctcgagccgaggcggccactccggcctccgtctcgaccgcgggcgcgagcctcgac
acggtgctcgaagccgccggtctcgtgtgggtcaacaccgacacggacaagctgcgcgcc
gcgcaggccgccgccgcgcaaatcgtgccgcccgcgcgcgtgccgcgcgaacgcaagccg
ttgccgcccgtcgacgcggcgccgatgcagcaggtcgagacgacgcaccgctga
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