Burkholderia thailandensis MSMB59: BTHA_313
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Entry
BTHA_313 CDS
T03416
Name
(GenBank) alkA N-terminal domain protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
btv
Burkholderia thailandensis MSMB59
Pathway
btv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
btv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BTHA_313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btv03400
]
BTHA_313
Enzymes [BR:
btv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BTHA_313
DNA repair and recombination proteins [BR:
btv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BTHA_313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
AfAlkA-like_TBP-like
Motif
Other DBs
NCBI-ProteinID:
AIS96056
LinkDB
All DBs
Position
1:330811..331752
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AA seq
313 aa
AA seq
DB search
MSAAVESAVVPSGSVVFELPFKPPYDWPRVLRFFAGRAIPGVEAVEGGAYRRTVDYRGAV
GALTVRKHPRKRCLVATVEGDAARHADAAFAARLATMFDLHADPAAIGAHLARDAWLAPL
VDAAPGLRVPGAWSSFELIVRAIVGQQVSVKAATTIVGRLVERAGERLVGHAPGATGWRF
PEPAALAACDLSRIGMPGKRAAALQGVARAVAAGDVPLDAYATDPAGVRAALLALPGIGP
WTVEYVAMRAWRDADAWPATDLVLMQAIVARDPALDRPASQRLRADAWRPWRAYAAMHLW
NEIADRAGSARGG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccgccgtcgaatcggccgtcgtgccgtccggcagcgtcgtgttcgagctgccg
ttcaaacctccatatgattggccgcgcgtgctgcgcttcttcgcggggcgcgcgatcccg
ggcgtcgaggcggtcgagggcggcgcgtaccggcgcacggtcgactatcgcggcgcggtc
ggggcgttgacggtgcgcaagcatccgcgcaagcgctgtctcgtcgccaccgtcgaaggc
gacgcagcgcggcacgcggacgcagcattcgccgcgcggcttgcgacgatgttcgatctg
catgccgatcccgccgcgatcggcgcgcatctcgcgcgcgacgcatggctcgcgccgctc
gtcgacgccgcgcctggcctgcgcgtgccgggcgcgtggtcgagcttcgagctgatcgtg
cgcgcgatcgtcggccagcaggtgagcgtgaaggccgcgacgacgatcgtcgggcggctt
gtcgagcgcgcgggcgagcggcttgtcgggcacgcaccgggcgcgaccggctggcggttt
cccgagcctgccgcgcttgccgcgtgcgacttgtcgcgaatcgggatgccgggcaagcgc
gccgcggcgctgcagggcgttgcgcgcgcggtcgccgcgggcgacgtgccgctcgatgcg
tacgcgaccgatccggccggcgtgcgcgccgcgctgctcgcgctgccgggaatcggcccg
tggaccgtcgaatatgtcgcgatgcgcgcatggcgcgatgccgacgcttggcccgcgacc
gatctcgtgctgatgcaggcgatcgtcgcgcgcgacccggcgctcgaccggccggcgagc
cagcgtctgcgcgccgatgcgtggcggccgtggcgcgcgtatgcggcgatgcatctgtgg
aacgagatcgccgatcgcgccggttcggcgcgcggcggatag
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