Burkholderia thailandensis MSMB59: BTHA_669
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Entry
BTHA_669 CDS
T03416
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
btv
Burkholderia thailandensis MSMB59
Pathway
btv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTHA_669 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btv03021
]
BTHA_669 (rpoC)
03400 DNA repair and recombination proteins [BR:
btv03400
]
BTHA_669 (rpoC)
Enzymes [BR:
btv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTHA_669 (rpoC)
Transcription machinery [BR:
btv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTHA_669 (rpoC)
DNA repair and recombination proteins [BR:
btv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTHA_669 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AIS95967
LinkDB
All DBs
Position
1:732488..736726
Genome browser
AA seq
1412 aa
AA seq
DB search
MKALLDLFKQVQQEEIFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRSINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPDWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAINGKGEGLSFTGVSEVIRAYENK
EVELASRVNVRITEMVRNEDTSEGAPQFVPKISLYATTVGRAILSEILPPGLPFSVLNKP
LKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPTQKEQIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVVDRDGNETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAASDVVNPETQETLYEAGTLLDETAVEDIERLGIDEVRVRTALTCETRYGLC
ASCYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GTVRFTATMRYVTNAKGEQIVISRSGEAMITDDIGRERERHKVPYGATLLQLDGAQIKAG
TQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGEEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDAQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIVDNGDTRFIPGEQVERSDMLDENDRMIAEGKRPATYENILLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKEQ
SDRERFDQIAAEEAFEFGTPSTPAEEPQHPAE
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctttgctcgatctattcaagcaagtccaacaagaagaaatttttgacgcgatc
aagatcggtctggcctcgccggacaagatccgctcgtggtcgttcggcgaagtgaagaag
ccggagacgatcaactaccgcacgttcaagcccgagcgcgacggtctgttctgcgcgaag
atcttcggcccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacgctcgcgaaggtgcgtcgtgag
cggatgggccacatcgagctcgcgtcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcgtacgtggtgatcgatccgggcatgacgccgctgaaggcgcgtcagatcatg
accgaagaggattactacaacaaggtcgaggaatacggcgacgaattccgcgccgagatg
ggcgcggaaggcgtgcgcgagctgctgcgctcgatcaacatcgacgagcaggtcgagacg
ctgcgcaccgagctcaagaacaccggctcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtgctcgaggcgttccagcgctcgggcatcaagcccgactggatgatcctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctcgacggcggccgtttc
gcgacgtcggatctgaacgacctgtaccgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagctgaaggcgccggagatcatcgtgcgcaacgaaaagcggatgctgcag
gaagccgtcgactcgctgctcgacaacggccgccgcggcaaggcgatgacgggggcgaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggtaagggcggccgcttccgtcag
aacctgctcggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgtggcctgccgaagctgatggcgctcgagctgttcaagccgttc
atcttcaacaagctggaagtgatgggcgtcgcgacgaccatcaaggcggcgaagaaggaa
gtcgagaaccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcacccg
gtgatgctcaaccgtgcgccgacgctgcaccgtctcggcatccaggcgttcgagcccgtg
ctgatcgaaggcaaggcgatccagctgcacccgctcgtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgcacgctgatgctcgcgtcgaacaacgtgctgttcccggcgaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacccgcgaggcgatcaacggc
aagggcgaaggtctttcgttcaccggcgtgtcggaagtgatccgcgcgtacgagaacaag
gaagtcgagctcgcgtcgcgcgtgaacgtgcggatcaccgaaatggtccgcaacgaggat
acgtccgaaggcgcgccgcagttcgtgccgaagatctcgctgtacgcgacgaccgtcggc
cgcgcgatcctgtcggaaatcctgccgccgggcctgccgttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaacaccgcgttccgcaagtgcggcctgcgc
gcgaccgtcgtgttcgccgaccagctgatgcagtcgggcttccgtctcgcgacgcgcgcc
ggcatctcgatctgcgtcgacgacatgctcgtgccgacgcagaaggaacagatcgtcggc
gacgccgcgaagaaggtgaaggagtacgaccgccagtacatgtcgggtctcgtcaccgcg
caggaacgctacaacaacgtggtcgacatctggtcggcgacgtcggaagcggtcggcaag
gcgatgatggagcagttgtcgacggagccggtggtcgatcgcgacggcaacgagacgcgc
caggaatcgttcaactcgatctacatgatggccgactcgggcgcccggggttcggcggtg
cagattcgtcagctggccggcatgcgcggcctgatggcgaagccggacggctcgattatc
gagacgccgattaccgcgaacttccgcgaaggcctgaacgtgctgcagtacttcatctcg
acccacggtgcacgtaagggtctggctgatacggcactgaagaccgcgaactcgggttat
ctgacgcgccgtctcgtcgacgtgacgcaggatctcgtcgtcgtggaagacgattgcggc
acgtccaacggcgtcgcgatgaaggcgctcgtggaaggcggtgaagtcgtcgaagcgctg
cgcgaccgtattctcggccgcgtcgcggcgtcggacgtcgtcaatccggaaacgcaggaa
accctgtacgaagcaggcacgctgctcgacgaaaccgcggtggaagacatcgaacgcctc
ggcatcgacgaagtgcgcgtgcgcacggcgctcacctgcgaaacgcgctatggcttgtgc
gcgtcgtgctacggccgcgatctcggccgcggctcgctcgtgaacgtcggcgaagcggtc
ggcgtgatcgcggcgcagtcgatcggcgaaccgggcacgcagctcacgatgcgtacgttc
cacatcggtggcgcggcatcgcgcgcggcagtggcgtcgtcggtcgaagcgaagagcaac
ggtacggtgcgcttcacggcgacgatgcgttacgtcacgaacgcgaagggcgagcagatc
gtcatctcgcgctcgggcgaggcgatgatcacggacgatatcggccgtgagcgcgaacgc
cacaaggtgccgtacggcgcgacgctgctgcagctcgacggtgcgcagatcaaggcgggt
acgcagttggctacgtgggatccgctgacgcgtccgatcatcaccgagtacggcggtacg
gtgaagttcgagaacgtcgaggaaggcgtgacggtcgccaagcagatcgatgacgtgacg
ggcctttcgaccctcgtcgtgatcgacgtgaagcgtcgcggttcgcaggcgtcgaagagc
gtgcggccgcaggtgaagctgctcgacgcgaacggcgaggaagtgaagatccccggcacg
gagcacgcggtgcagatcggcttccaggtcggcgcgctgatcaccgtgaaggacggtcag
caggtgcaggtgggtgaagtgctcgcacgtatcccgaccgaagcgcagaagacgcgtgac
attaccggcggtctgccgcgcgtggccgagctgttcgaagcgcgttcgccgaaggatgcg
ggcattctcgcggaagtcaccggcacgacgtcgttcggcaaggacacgaagggcaagcag
cgtctcgtcatcacggatctcgagggcaaccagcacgagttcctgatcgcgaaggaaaag
caggtgctggtccacgatgctcaggtcgtcaacaagggcgaaatgatcgtggacggcccg
gccgatccgcacgacatcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtc
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgtcagatgctgcgccgcgtgcagatcgtcgacaacggcgatacgcgcttc
attccgggcgagcaggtcgagcgctcggacatgctggacgagaacgaccgcatgatcgcg
gaaggcaagcgcccggcgacgtacgagaacatcctgctgggtatcacgaaggcgtcgctg
tcgaccgattcgttcatctccgcggcatcgttccaggaaacgacccgcgtgctgaccgag
gctgcgatcatgggcaagcgcgacgatctgcgtggcctgaaggaaaacgtgatcgtcggc
cgtctgatcccggccggtacgggtctcgcgttccacaaggcgcgcaaggcgaaggagcaa
tccgatcgcgagcgtttcgaccagatcgcagcggaagaagcgttcgagttcggcacgccg
agcacgcccgccgaagagccgcagcacccggcggagtaa
DBGET
integrated database retrieval system
