Burkholderia thailandensis MSMB59: BTHA_956
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Entry
BTHA_956 CDS
T03416
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
btv
Burkholderia thailandensis MSMB59
Brite
KEGG Orthology (KO) [BR:
btv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btv03016
]
BTHA_956
Enzymes [BR:
btv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BTHA_956
Transfer RNA biogenesis [BR:
btv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BTHA_956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AIS96821
LinkDB
All DBs
Position
1:1026140..1028212
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AA seq
690 aa
AA seq
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MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAAGELMQQADEA
AQQIDLDFLWECAPAEEFAYATLADEYFGASYGPVERAALVLRLHGAPVYFRRKGRGQYQ
RAPEEQLKMALAALERKRQQALVQAGYEEELKAGRLPDAFAGKALGLLTRPDKNSIEYKA
LDAAALARGVSPARLLLDCGGIPSARALHEARFLAEYFPHGTGFPPVTVGKLPDDLPRAD
VDAFSIDDVTTTEIDDAFSVEHLSDGRVRIGVHIAAPALGVVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGGYRPALSLYIIVKRDTQEIVANETRAEFVYVKSNLRHNT
LDGLVTEDALAAGTGDYPHKDDIAVLWPLAQALFERRQVARAGYGLKREVQRNTDYNFYV
EGERVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMPSGPKRTR
MQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQKDADLYA
VVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDDVPLLLHVPAL
GVHARGTRVLLDVMSVDELTIEASVRLLSVLDAPTVSGGEPSDDEEDAGAADDVLLDAAD
ESAESEAEALAEASGGGNGESPANGEEQSK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgaattgccgggcggccggcgcgcgaaggtgcgcgcgaaggat
gtgctgatcgaattcgagaagcccgccgcgggcgaactgatgcagcaggcggatgaagcc
gcccagcagatcgatctggactttctgtgggagtgcgcgcccgctgaggaattcgcgtat
gcaacgctcgccgacgagtatttcggcgcgagctacggccccgtcgagcgcgcggcgctc
gtgctgcgcctgcacggcgcgcccgtctacttccgccgcaaggggcgcggccagtatcag
cgcgcgcccgaggagcagctgaaaatggcgctcgccgcgctcgagcgcaagcgccagcag
gcgctcgtgcaggccggctacgaagaggaactgaaggcgggcaggctgcccgacgcgttc
gcgggcaaggcgctcggcctgctgacgaggccggacaagaactcgatcgaatacaaggcg
ctcgatgcggcggcgctcgcgcgcggcgtgtcgcccgcgcgtctcctgctcgactgcggc
ggcattccgtcggcgcgcgcgttgcatgaggcgcgctttctcgccgagtacttcccgcac
ggcacgggctttccgcccgtcacggtcggcaagctgcccgacgacctgccgcgcgcggac
gtcgacgcgttctcgatcgacgacgtcacgacgaccgagatcgacgacgcgttctccgtc
gagcatctgtccgatgggcgcgtgcgcatcggcgtgcacatcgcggcgcccgcgctcggc
gtcgtgcgcggcgacgcggtggatgcgatcgcgcgcgcgcggctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtggtcgacgtgttcacgctgaaggag
ggcggctaccgcccggcgctgtcgctgtacatcatcgtgaagcgcgacacgcaggagatc
gtcgcgaacgagacgcgggccgaattcgtctatgtgaagagcaacctgcggcacaacacg
ctcgacgggctcgtcacggaagacgcgctcgcggcgggcacgggcgactatccgcacaag
gacgatatcgcggtgctctggccgctcgcgcaggcgctcttcgagcggcgccaggtcgcg
cgcgcgggctacgggctcaaacgcgaagtgcagcgcaataccgattacaacttctatgtc
gaaggcgagcgcgtgtcgatcacgccgcgccggcgcgggtcgccgctcgatctgatcgtg
tcggaactcgcgattctcgcgaactcgacgtggggcgcgttcctgcacgatcacagcgtg
cccggcatctatcgcacgcagcgcgcgttcggcatgccgagcgggccgaagcgcacgcgg
atgcagacgagcgctgcgccgcacgaggggctcggcgtgccgcagtatgcgtggagcacg
tcgccgctgcgccgttacgtcgacctcgtcaatcagtggcaactgctcgcgtgcgtgcag
cacggcgtgaccgcgaagctcgccgcgccgttcaagcagaaggacgcggatctgtacgcg
gtcgtgcagggtttcgacgacacgtacgccgcatacgccgaccaccagcgccggatggag
tatttctggtgcctgcgctggatcaagcaggaaggccgcaagcaggtgagcgcgaccgtc
gtgaagggcgagctcgtgcgcctcgacgacgtgccgctgctgctgcacgtgcccgcgctc
ggcgtgcatgcgcgcggcacgcgggtgctgctcgatgtgatgtcggtcgacgaattgacg
atcgaggcgtcggtgcggcttctcagcgtgctcgatgcgccgacggtgtcgggcggcgag
ccgtcggacgatgaagaggacgccggcgcggccgacgacgtgctgctcgacgccgccgac
gaatcggcggaaagcgaagcggaagcgctcgccgaggcgagcggcggcggcaatggcgaa
tcgccggcgaacggcgaggaacagtcgaaatga
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