Bacillus thuringiensis HD1011: BF38_1059
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Entry
BF38_1059 CDS
T03675
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
btw
Bacillus thuringiensis HD1011
Pathway
btw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BF38_1059 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btw03021
]
BF38_1059 (rho)
03019 Messenger RNA biogenesis [BR:
btw03019
]
BF38_1059 (rho)
Transcription machinery [BR:
btw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BF38_1059 (rho)
Messenger RNA biogenesis [BR:
btw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BF38_1059 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJG77482
UniProt:
A0A0B5NVK1
LinkDB
All DBs
Position
complement(1004074..1005345)
Genome browser
AA seq
423 aa
AA seq
DB search
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFAILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPESAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVESFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaagaatttaagatttcgtattatagcaaattaacgaaaaaagagttaatcttcgccatt
ttaaaagctcgagcagaaaaagaaggtttcttcttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcctacgtcctatcaactactctccaagctcagaagatatt
tatatctcagcttcgcaaattcgtcgtttcgatttacgtaatggagataaagtttctggt
aaagtacgacctccgaaagaaaatgaacgctactttggattattacaagttgaagctgta
aacggagatgatccagagtcagcaaaagagcgtgtgcatttccctgcattaacaccatta
tacccagatcgccaaatgaaattggaaacggaaccgaaaaagttaccgacacgcatcatg
gatttaattgcaccagttggatttggacaacgtggtttaattgtcgcgcctccaaaggct
ggtaaaacaagtctattaaaagaaatcgcgcacagtgttacaacaaatcatccggaagct
gaattaattgtacttttaattgatgagcgtccagaggaagtaacagacattgaacgttct
gttaaaggagatgttgtaagctctacttttgatgaagtaccagaaaatcatattaaagta
gcggaacttgtgttagaacgtgcaatgcgtcttgtagagcacaaaaaagatgttatcatt
ttaatggatagtattacccgtttagcgcgagcttacaaccttgttattccgccaagtggt
agaacattatcgggtggtatcgacccagctgccttccatagaccgaagcgcttctttgga
gctgcacgtaatattgaagaaggcggtagcttaactattttagcaacagcgcttgttgat
acaggatctcgtatggacgatgtaatttacgaagaatttaaaggaactggaaatatggaa
cttcacttagatcgttcattagctgagcgtcgtatcttcccggcaattgatattcgccgt
tctggtacacgtaaagaggatctattaattccgaaagaacatttagacaagctgtggggt
attcgtaaaacaatgcgtgatacaccagactttgttgaaagtttcttacgtaaacttcgt
caaacaaagacaaatgaagaatttttacaaaacattgttgcagattcgaaaagatatgta
acaactaagtaa
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