Bacillus thuringiensis HD1011: BF38_1495
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Entry
BF38_1495 CDS
T03675
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btw
Bacillus thuringiensis HD1011
Pathway
btw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BF38_1495 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btw03019
]
BF38_1495 (cshA)
03009 Ribosome biogenesis [BR:
btw03009
]
BF38_1495 (cshA)
Enzymes [BR:
btw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BF38_1495 (cshA)
Messenger RNA biogenesis [BR:
btw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BF38_1495 (cshA)
Ribosome biogenesis [BR:
btw03009
]
Prokaryotic type
rRNA helicases
BF38_1495 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AJG76123
UniProt:
A0A0B6B9T7
LinkDB
All DBs
Position
1421044..1422630
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AA seq
528 aa
AA seq
DB search
MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDGRGGDGRNRDRNRD
GRNRDGNRDRNREGSRDGNRGRRGEGQGRPGSSNGRGERKHHSRKPQA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgattctttactgcaatctgttgaaagtatg
ggctttgaagaggctacgccaattcaagctgaaacaattccacatgcattgcaaggtaag
gatattattgggcaagcacaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacacataaagaatcggttcaaggtattgttattgcgccaacgcgt
gaattagcaattcaagttggagaagagctatacaaaattggtaaacataaacgtgttcgt
atcttaccaatttacggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcttacaaaacgtagagacagttgttcttgacgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcaattttaacagatgtgccagaaacacatcaaacattacta
ttctcagcgacaatgccggacccaattcgtcgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttactagatattcaatctcca
gagcttgcgattgtgttcggtcgtacaaagcgtcgtgttgatgaattatcagaggcatta
aacttacgtggttatgctgcagaaggtatccatggtgatttaactcaggcgaaacgtatg
tctgtattacgtaaattcaaagaaggttctattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacacacgtatataacttcgatattccacaagat
ccagaatcatatgttcaccgtattggccgtactggtcgtgcaggtaaaaaaggtattgca
atgctatttgtaacaccacgtgaatctggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaaatggaccgcatggatgcaccgacacttgacgaggcactagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacaattgaaaatgaaaacttagcatactacaagcgt
attgcagaagaaatgttagaagagaacgactctgtaacagtagtagctgctgctttaaaa
atgatgacaaaagagccagatacaactccaatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggttctaaaaaacgcggcggtaacggaggcggataccgtgatggtaat
cgtaatcgtagtcgtgatggacgcggtggcgatggtcgtaaccgtgaccgcaatcgtgat
ggtcgtaatcgtgacggtaaccgtgatcgcaatcgtgaaggtagccgtgatggtaaccgt
ggtcgtcgtggcgaaggtcaaggacgcccaggatcttcaaacggacgcggcgaaagaaaa
catcatagccgtaagccacaagcttaa
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