Bacillus thuringiensis HD1011: BF38_4152
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Entry
BF38_4152 CDS
T03675
Name
(GenBank) tRNA-splicing ligase RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
btw
Bacillus thuringiensis HD1011
Brite
KEGG Orthology (KO) [BR:
btw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btw03016
]
BF38_4152
Enzymes [BR:
btw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BF38_4152
Transfer RNA biogenesis [BR:
btw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BF38_4152
Prokaryotic type
tRNA splicing ligases
BF38_4152
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF6922
SpoIISA_toxin
Motif
Other DBs
NCBI-ProteinID:
AJG77402
UniProt:
A0A0B5NVC6
LinkDB
All DBs
Position
complement(3995328..3996515)
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AA seq
395 aa
AA seq
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MLKLQGKYNEAKVFTNNVDETATGQIIDLCNQEFVKDSQIRIMPDTHAGAGCTIGTTMTI
QDKIVPNLVGVDIGCGMEVVVIDKKKEEINFDYLDETIRKFVPSGFRIRDKEHRFSKMID
FDGVRAPFTLQRAQKSIGTLGGGNHFVELNEDDKGNVYIVIHSGSRNLGKQIAEYYQNFA
YEQLIDVTSIKDDIIKRLTEEGRAKEIQETLRGIQKPKIRKELAYLEGQGFKDYMNDMNI
AQKYAALNRKAMIDEIVTKMDWKITDQFTTIHNYIDIENMILRKGAISAQKDERVIIPIN
MRDGSIIAFGKGNPDWNFSGPHGAGRIMSRKKAKESLSLEEFQNTMTEVWTTSVVESTID
EAPMVYKPMDEIIENTKETIDIKHIIKPLYNFKAN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaattacaaggaaaatacaatgaagcgaaagtatttacgaataacgttgatgag
actgcgacagggcagattattgatctttgtaaccaagaatttgtaaaggatagtcaaatt
cgtattatgccagatacacatgcaggagcaggttgtacgattgggacaacaatgacaatc
caagataaaattgttcctaatcttgtaggggtagatattgggtgtgggatggaagttgtt
gtaattgataagaaaaaagaagaaattaatttcgattacttagacgaaacaattcgtaaa
ttcgttccaagtggttttcgtatacgagataaggaacatcgattctcaaaaatgattgat
tttgatggtgtgagagctccatttacattacaacgcgctcaaaaaagtattggtacactt
gggggaggaaatcattttgtcgaattgaatgaggacgataaaggtaatgtatatattgtc
attcatagtggttcgcgtaatttaggtaagcaaattgcagagtattaccaaaacttcgca
tatgaacaacttattgatgttacatcaataaaagatgatattattaagaggttaactgaa
gaggggagagcaaaagaaatacaagaaactttacgtggaattcagaagccaaagattcgt
aaagaactagcttatttagaagggcaagggttcaaagattatatgaatgacatgaatatt
gcccaaaaatatgcggcgttaaatcgtaaagcaatgattgatgaaattgttacgaaaatg
gactggaaaattacagatcaatttactacaatacataactatattgacatagaaaatatg
attctacgaaaaggtgctatttcagctcagaaagatgaacgagtcattattccaattaac
atgagagatggttcaattattgcatttggtaaagggaatccagactggaatttttctggt
ccgcatggggcaggacgtatcatgagtcgtaagaaggctaaagaatcattgagtctagag
gaatttcaaaatacgatgacagaggtttggactacatcagtagtagaaagtacaattgac
gaggcaccaatggtatataagccaatggatgaaattatagaaaatacaaaagaaacgata
gatataaaacacattattaagccgttgtataattttaaagcgaattag
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