Bacillus thuringiensis HD1011: BF38_4788
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Entry
BF38_4788 CDS
T03675
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
btw
Bacillus thuringiensis HD1011
Pathway
btw03030
DNA replication
btw03430
Mismatch repair
btw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BF38_4788
03430 Mismatch repair
BF38_4788
03440 Homologous recombination
BF38_4788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btw03032
]
BF38_4788
03400 DNA repair and recombination proteins [BR:
btw03400
]
BF38_4788
Enzymes [BR:
btw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BF38_4788
DNA replication proteins [BR:
btw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BF38_4788
DNA repair and recombination proteins [BR:
btw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BF38_4788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
DDE_Tnp_IS66
Motif
Other DBs
NCBI-ProteinID:
AJG75456
UniProt:
A0A0B5NND4
LinkDB
All DBs
Position
complement(4636549..4637496)
Genome browser
AA seq
315 aa
AA seq
DB search
MGNISLPLDYVVIDFETTGFNPYNDKIIQVAAVKYRNHELVDQFVSYVNPKRPIPDRITS
LTGITNYRVSDAPTIEEVLPLFLAFLHTNVIVAHNASFDMRFLKSNVNMLGLPEPKNKVI
DTVFLAKKYMKHAPNHKLETLKRMLGIRLSSHNAFDDCITCAAVYQKCASIEEEAKRKSN
TEVLDETAVYEAVKEILVRNKRDIEWIRCMNVGSYLDIKAFYPVMRLKVKGRKKYVLTDI
LEDDVKEICTSLACEPALKSEVGNTRIMLNCSEDVLKLESYILEQYDFVLQALHDYKQSE
MNADEKLKEYLNIMV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggggaatatatccttaccgttagattatgttgtaattgactttgaaacaacaggattt
aacccttataatgataaaatcattcaagtggcggcagtgaaatatcgtaatcatgaacta
gtagatcaatttgtttcctatgtgaatccgaagcgtccaatcccggaccgaataacgagt
ttaacaggtattacaaattatcgtgtttcggatgcaccgacgattgaagaagtgttacct
ttatttttagcatttttacatacaaatgtaattgtcgctcataatgcatcttttgatatg
cgctttttgaaaagtaatgtgaatatgcttggtttaccggaaccgaaaaataaagtgatt
gatactgtatttttagcgaagaaatatatgaagcacgctcctaatcataaacttgaaacg
ttaaagcgaatgcttggaattcgtttgagttctcataatgcatttgatgattgtattacg
tgtgcagcagtttatcaaaaatgtgcctctattgaagaagaggcgaaaaggaaatcgaat
acagaagtacttgatgagacagcagtatatgaagcggtaaaagagatacttgtacgaaat
aaacgtgatattgaatggattcgttgcatgaatgtaggaagctatttagatataaaagct
ttttatccagttatgagattaaaggtaaaagggcgaaagaaatacgtattaacagacata
ttagaagatgatgtgaaagaaatatgtacgagtttagcctgtgaaccggcgttaaaaagt
gaagttggtaacacgagaattatgcttaattgctcagaggacgtcctgaaattagaaagt
tatattttagaacagtatgatttcgtactgcaagcgctgcatgattataaacaaagtgaa
atgaatgcagatgaaaagttaaaagagtatttaaatattatggtatga
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