Bacillus thuringiensis HD1011: BF38_49
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Entry
BF38_49 CDS
T03675
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
btw
Bacillus thuringiensis HD1011
Pathway
btw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
btw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BF38_49 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btw03021
]
BF38_49 (sigA)
Transcription machinery [BR:
btw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF38_49 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF2408
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AJG76544
LinkDB
All DBs
Position
complement(47085..48206)
Genome browser
AA seq
373 aa
AA seq
DB search
MADKPARSKQIETEMTLEQVKEQLTELGKKRGVLTYEEIAERMNGFEIESDQMDEYYEYL
GEQGIDLVGDNDEGPNNHQITKTEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLSAE
EEIRLATRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKF
DYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPS
PEEIGEEMDLAPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPADHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaaccagctcgttctaaacaaattgaaactgaaatgacccttgagcaagtg
aaagaacaactcactgagctcggaaaaaaacgtggcgttcttacatatgaagagattgca
gaacgcatgaatggatttgaaattgaatccgatcaaatggatgaatactatgaatattta
ggtgaacaagggattgacttagttggcgacaacgatgaaggccctaataatcaccaaatt
acgaaaacagaagaagagtttgacctaaatgacttaagtgtaccaccaggggttaaaatc
aacgatcctgttcgtatgtatttaaaagaaattggtcgtgtagatttactatctgcagaa
gaagaaattcgacttgcaacgcgtattgaagaaggcgatgaagaagcaaaacgtcgtctt
gcagaagcaaacttacgtcttgtagtaagtattgcaaagcgctacgtaggccgcggtatg
cttttcttagacttaatccaagaagggaatatgggtctaattaaagcggttgaaaagttc
gattatcgtaaaggtttcaaatttagtacgtatgcaacttggtggattcgccaagcaatt
acacgtgcgattgcagaccaagcaagaacaattcgtatcccagttcatatggttgaaacg
ataaataagttaattcgtgtacaacgtcaattattacaagatttaggacgtgaaccatct
cctgaagagattggtgaagaaatggatcttgctccagaaaaagtgcgcgaaatcttaaaa
attgctcaggagccagtctctcttgaaacaccgattggtgaagaagatgactcccattta
ggtgattttattgaagaccaagaagcaacatcgcctgcggaccatgcagcgtatgaattg
ctaaaagaacaattagaagatgtgttagatacactaacagatcgtgaagaaaatgttcta
cgtcttcgttttggtttagatgatggacgaactcgtacgcttgaagaagttgggaaagta
ttcggcgtaacgagagaacgtattcgtcaaattgaagcaaaagcacttcgtaaattgaga
catcctagccgtagtaagcgtcttaaggatttcttagaatag
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