Bacillus thuringiensis HD1011: BF38_4948
Help
Entry
BF38_4948 CDS
T03675
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
btw
Bacillus thuringiensis HD1011
Pathway
btw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BF38_4948 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btw03019
]
BF38_4948 (rny)
Messenger RNA biogenesis [BR:
btw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BF38_4948 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF2844
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AJG78230
UniProt:
A0A0B6BP11
LinkDB
All DBs
Position
complement(4803207..4804769)
Genome browser
AA seq
520 aa
AA seq
DB search
MSSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEAKRILDEANREAEALKKEALL
EAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKRELQLEKKEDSLV
ARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV
RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacagtttggatactcatctccattttgcttgcaacagtcggtgcagttgtt
ggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcagctaatgaagcg
aaacgtattctagacgaagcgaatcgtgaggctgaagcacttaagaaagaagcgctatta
gaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgaccgt
agaagcgaattacaaaaacaagaaaatcgtttaatgcaaaaagaagagaaccttgatcgt
aaagacgaaacgctcgataaacgcgagctacagttagaaaagaaagaggattctcttgta
gcgagacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaagcaa
caaacagaattagagcgcatttccaatctgacacgcgaacaagcgaaagcaattattctt
ggtaaagtagaaagtgaagtttctcatgaaattgccgtaatggtaaaagaaagtgaagtt
cgtgcgaaagaagaagcagataagaaagcaaaagagattttatctcttgcaatgcagaga
tgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaatgacgaa
atgaagggacgtattatcggacgtgaaggtcgaaatattcgtacgttagaaacgttaaca
ggtattgacctaattatcgatgatacaccagaagcggttatcctttctggattcgaccca
attcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgtattcac
ccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatattcgt
gaagtcggagagcaaacaacgtttgaagtgggtgttcacggtttacatccagatttaatt
aagattttaggtcgtttaaaataccgtacaagttacggacaaaacgtcttaaaacactct
atggaagttgcatatttaactggacttatggcagcagagcttggtgaggatgaaaaacta
gcaagacgtgctggtctattacatgatatcggtaaagcgattgaccatgaagtagaaggt
agccacgttgaaattggtgttgaactcgcaacgaaatataaagagcatcctgtagttata
aacagtattgcatctcaccatggggacacagaaccaacttctatcattgcagttttagtt
gcagcagcagatgcattatcagctgcaagacctggagctcgtagtgaaacacttgagaac
tatattcgtcgtcttgaaaagttagaagagatttcagagtcttatgaaggcgtagaaaaa
tctttcgcaattcaagcaggacgagaagttcgtattttggtaaaaccagatacaattgat
gatttagaagctcatcgtttagctcgtgatattcgaaaacgtattgaaaatgaactggat
tacccaggacatattaaagtaactgttattcgtgaaacacgtgcagtggaatacgcaaaa
taa
DBGET
integrated database retrieval system