Bacillus thuringiensis HD1011: BF38_870
Help
Entry
BF38_870 CDS
T03675
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
btw
Bacillus thuringiensis HD1011
Pathway
btw02020
Two-component system
btw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
btw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF38_870 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BF38_870 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btw03021
]
BF38_870 (rpoN)
Transcription machinery [BR:
btw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF38_870 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_32
Motif
Other DBs
NCBI-ProteinID:
AJG76137
LinkDB
All DBs
Position
complement(817331..818638)
Genome browser
AA seq
435 aa
AA seq
DB search
MKASLLQEQSLRLAMTQELRQAITMLQYNVQELSEFLYEQSLENPLIELGGFEREKKKSS
NNSKSTSKQVENQMEIYSVDSTTIQQHLLNQIQYYKIEEEERKVASFIIMNMDGNGYLQE
TNEELANLLSAPLHVVDRSVELVQSLEPAGVGARNIQECLTLQLKRLQRRNGLAEEVVED
HFAYFVKKDWRKLVQVLKCSNEELQDAVNCITSLQPKPGLAFSSDKPLYIVPDMAVKKDG
DRLVLQMNERNMPRIEIHSEYSALLNNSESEVASYVSEKYQHVQWIMRSLKQRKQTLLQV
MTIIMEKQRDFFWKGPEYLKPLALKEVAEELSVHESTISRATRNKYVQTPHGLFEMKSFF
SNAVSTTEDEAVSTKRVKQFIQTLVEAENKKKPLSDQKISKLLEEEHEIVISRRTVAKYR
EQMHIPASSLRKTIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggcaagtcttttacaagaacaaagcttacgtttggcaatgacacaagagttaagg
caagcgattacaatgctccagtataatgtacaagaattatcggagtttttgtatgagcaa
tcgttagagaatccccttattgagttaggtggttttgagagggagaagaaaaagagctct
aacaacagtaaaagtaccagcaaacaagtcgagaatcagatggaaatctacagtgtggat
tcaacaacgattcagcaacatttattaaatcaaatacagtattataaaatagaggaagaa
gagcgaaaagtagcttctttcattattatgaacatggatggaaatgggtatttacaagaa
acgaatgaagagttagcaaatcttctttccgcaccactgcatgtagtcgaccgctctgta
gagcttgtccaatcactcgagccagcaggggtaggggcgcgtaatattcaggaatgtcta
accttgcaattgaagcgcttacaaaggcggaatggattggcagaagaggttgtagaagat
catttcgcttatttcgtgaagaaagattggagaaagcttgttcaagtgttgaagtgtagt
aatgaagaattacaggatgcagtaaattgtataacgtcattacaaccaaaaccaggtctt
gcgttttcttctgataaaccactttatattgtgcctgatatggcagtgaaaaaagatggc
gatcgtctcgttttacaaatgaatgagagaaatatgccgagaattgagattcattctgaa
tatagtgcgcttcttaataatagtgaaagtgaagtagcatcttacgtatcagaaaagtat
cagcatgtgcagtggattatgcgtagtttgaaacagagaaaacaaacgcttttgcaagta
atgaccattattatggaaaaacaacgtgatttcttctggaaaggtccggagtatttaaag
ccacttgctttaaaagaagtagcagaagagctaagtgtgcatgaatctacaattagtcgt
gcaacgcgaaataaatatgtgcaaacaccacacggtttatttgagatgaaatcgttcttt
agtaatgccgtttcgacgactgaagatgaagcggtttctacaaagcgtgtaaaacaattt
attcaaacgcttgttgaggcggagaataagaaaaagccactttcagaccaaaagatttca
aaattgttagaagaagaacatgaaattgttatttctcgaagaacagtggcgaagtataga
gagcaaatgcacatcccagcatcgtcattacgaaaaacgatcggatag
DBGET
integrated database retrieval system
