Bartonella tribocorum BM1374166: BM1374166_00024
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Entry
BM1374166_00024 CDS
T03233
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
btx
Bartonella tribocorum BM1374166
Brite
KEGG Orthology (KO) [BR:
btx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btx03400
]
BM1374166_00024 (addB)
Enzymes [BR:
btx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BM1374166_00024 (addB)
DNA repair and recombination proteins [BR:
btx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BM1374166_00024 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Pdase_C33_assoc
Motif
Other DBs
NCBI-ProteinID:
CDO47721
LinkDB
All DBs
Position
26386..29511
Genome browser
AA seq
1041 aa
AA seq
DB search
MTYKPRVFSISPGTAFLPHFVDALLSGTLIDDFAPNGDIQTALADSLIYVPTRRAARALR
LAFVERSETQSTFLPTIRALGDVDEDSFLFVENHTSVLNPPIGESERLLLLARLIRPWRE
SLPAHLRALFGTEDVLIPAHSADAIWLAQDLAHLMDEIETEAADWSKLKDIAPDMVAEWW
QITLDFLTIVTQNWPQILTERQRSNPAEWRNQALTMHAETLRRTQPDKPIIAAGVSGSIP
AVSHLLKVIASLPKGAVVLPGLDLHMDEDQWNALSTSNKEKTVCDFFDHAENVFSHPQYH
LKKLLTLMDCQRDHVCEIGQQSSIKKRRMALLSEALRPASTTDKWIQIVRDDYESLCADW
SFIEAINEREEALAIAVALRKAIEEPQKTTALITNDRNLARRVAAELQRFGIEANDSGGI
PLAQTLPVTLLRLILENVFQSDDPIAFLSLLKHPLTTLQQNRHRLREMAENFELFVLRGN
TGRINLCECDQFLEKWIETYSHDHNFSEINALDQQKFEEARLLCHLLKKAVEPLASLMKQ
EKECTINEAAIATVEVFENFGRSEDNSLAHLYQHEAGQALSNFLRELVSDQSGLTFHLCE
WPAVFSALIATRSVTPSPGGHPRLFIWGTLESRLQTVDTVVIGGLNEGSWPISTRNDAFL
SRPMKMMLTLEPPEQRIGLSAHDFQWAMGMDKVVMSRALRVNHTPSIPSRWLQRIETVVG
KQAWKQIRARGEILRHWTKMLDHTNMISDVERPCPVPPLDGRPRHFSVTEIETLRYDPYA
IYAKKILRLRPLKPLIHDPSAIERGILYHAILAAFCAQIKNPNAANALDVLLTLGRKEFD
KFNFPPDIEVIWWNSFENLAPHLIQWEQSLGPRERYAEVVSEKISIGTTGVTLSGRVDRL
DVLPDKTVEILDFKTGTPPSSKQVRKLLFPQLALETALLMEGAFPDFQDLTPSNLFYIPL
NGKGEIKSQSILLKKKEENTYLSAVNLGEIAWKNLIALITYYQNPQQGYLSHAVPMEKRY
EGDYDHLARLWEWSSGFYKEE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgacttataaaccacgtgtcttttctatttctcctggaacggcttttttgcctcatttt
gttgatgcgctgctctctggtacccttattgatgattttgctcccaatggagatattcaa
acggcccttgccgatagtcttatttatgttccgacacgtcgtgcggctcgggctttgcgt
ttagcctttgttgaaagaagcgagacacaatcaaccttcttgccaaccattcgtgcccta
ggcgatgttgatgaagacagtttcctttttgttgaaaatcataccagcgtgcttaatccg
cctattggagagagcgaacgcctattgcttttagcgcgtcttattcgtccatggcgtgaa
agtttgcctgcacatttgcgtgctctgtttggtacagaagatgtacttattccagcgcat
agtgccgatgcaatttggcttgctcaagatttggcacatttgatggatgaaattgaaaca
gaagcagcagactggtcaaaactgaaagatattgcccctgatatggttgctgaatggtgg
caaataacgctcgatttcctaactattgttacacaaaattggccacaaatcttgacagaa
aggcagcgaagtaatcccgctgaatggcgtaatcaagcacttacaatgcatgcagagact
ttacgacgtacgcagcctgataaaccgatcattgcggctggtgtttcaggttctattcct
gcagtttctcatcttttaaaggttatagcctctctaccaaaaggagctgttgttcttcca
ggccttgatcttcatatggatgaagatcaatggaatgcacttagcacaagcaataaagaa
aaaacagtttgtgatttttttgatcatgcagaaaatgtttttagccatcctcaatatcat
ttaaaaaaacttctaactctcatggactgtcaacgcgatcatgtttgcgaaattggccaa
cagagtagcataaaaaaaaggcgaatggcgcttttatcagaagcactccgaccagcttct
acgacagacaaatggatacaaattgttcgtgatgactatgaaagtctttgtgcagattgg
tcatttattgaagctatcaacgaacgtgaagaggctctcgctatcgctgttgctttacgc
aaagctattgaagaaccccaaaaaaccacagcccttattaccaatgatcgtaacttagcc
cgccgtgttgctgcggaattacagcgatttggcattgaagcaaatgattcagggggaata
ccacttgcacaaacattgcctgtaacgctcttgcggcttatcttagaaaatgttttccaa
tctgatgatcccattgcttttctttcccttcttaaacatccactgacaacactccaacaa
aaccgtcatcgtttacgcgaaatggcagaaaattttgaactttttgttcttcgagggaac
acggggcgcatcaatctttgcgagtgtgatcaatttcttgaaaaatggattgaaacctat
tctcatgatcataatttttctgaaattaatgcccttgatcagcagaaatttgaagaagca
cgtctcctgtgtcatcttttgaagaaagctgttgaacctttagcttctctcatgaaacaa
gagaaagaatgcaccatcaacgaagctgcgatagcaacggttgaggtttttgaaaatttt
gggcgcagtgaggataattctcttgctcatctttatcaacacgaagcaggacaagccctc
tcaaattttttacgggaattggtcagtgatcaatcaggattaacatttcatctttgcgaa
tggcctgctgtgttttccgcattgattgcaacgcgttctgttacaccttcgcctggagga
catccgcgtttattcatttgggggactttagaatcacgtttgcaaacggttgatacagtg
gttattggcggtcttaatgaagggtcatggccgatatcaacccgcaatgatgctttttta
tcgcgaccgatgaaaatgatgttaactctagaaccaccagagcagcgtattggtctttcc
gcccatgattttcaatgggctatgggaatggataaagtggtgatgagtcgcgccttgcgt
gttaatcatacgccttctattccttcacgctggctacaacgcatagaaacagtggtagga
aaacaggcttggaaacaaattcgtgcacgaggtgaaatattacgccattggacaaagatg
cttgatcataccaacatgatttctgatgtagaacgtccttgccctgtaccaccccttgat
ggacgtccgcgtcatttttcagtcactgaaatagaaacattgcgctatgatccttatgct
atctatgccaaaaaaatcttacgactgagaccacttaaaccacttattcacgatcctagc
gctattgagcgcggaatactttatcacgctattcttgcagctttttgcgcacagataaaa
aatccaaatgccgcaaatgcattagatgttctgcttactcttggacgtaaagaatttgat
aaattcaattttccacccgatattgaagtcatttggtggaacagttttgaaaatcttgct
ccacatcttattcaatgggaacaaagtttaggaccgcgagagcgatatgctgaagtggtc
tcagaaaaaatctctatagggacaacaggggtaaccctttcagggcgtgttgatcgtctt
gatgttttgccagacaaaacggttgaaattctagatttcaaaactggaacacctccttca
tcaaaacaagttcgtaaattattatttccacaattggctttagaaacagctttgctgatg
gaaggggcatttccagattttcaagatcttaccccctcaaatttattttacattcccctg
aacggaaaaggtgaaattaaatcccaatccattcttttaaagaaaaaagaagaaaacact
tacctcagtgcagttaatcttggtgaaattgcatggaaaaatcttattgcacttataacg
tattatcaaaatccacaacaaggctatctttcacatgctgttcccatggaaaaacgatat
gaaggtgactacgaccatttggcacggttgtgggaatggtcaagtggtttttataaagaa
gagtaa
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