Bartonella tribocorum BM1374166: BM1374166_00211
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Entry
BM1374166_00211 CDS
T03233
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
btx
Bartonella tribocorum BM1374166
Pathway
btx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM1374166_00211 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btx03019
]
BM1374166_00211 (pnp)
03016 Transfer RNA biogenesis [BR:
btx03016
]
BM1374166_00211 (pnp)
Enzymes [BR:
btx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BM1374166_00211 (pnp)
Messenger RNA biogenesis [BR:
btx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BM1374166_00211 (pnp)
Transfer RNA biogenesis [BR:
btx03016
]
Prokaryotic type
tRNA degradation factors
BM1374166_00211 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
CDO47904
LinkDB
All DBs
Position
complement(292930..295125)
Genome browser
AA seq
731 aa
AA seq
DB search
MFKTHKIEIEWAGRPLTLETGKIARQADGAVIATYGETIVLATVVSAKSPKPDQDFFPLT
VNYQEKSYAVGRIPGGYLKRESRPSENETLVSRLIDRPIRPLFVEGYKNDTQVIVSVIQH
DLENNPDILAMIASSAALTLSGVPFMGPIAGARVGYCNGQYVLNPHMDEMPESKLDLVVA
GTESAVLMVESEAQELPEDIMLGAVMFGHKGLQPVLDAIIKLAEVAAKDPRDFVPEDLSD
LEKAMQEMAEQDIRKAYTITDKQERYAAIDALKTEIINKFMPETEEDCQFSTDQIATVFK
QLQAKIVRGNILDTKKRIDGRNLSTVRPIQSEVSILPRTHGSALFTRGETQAIVVATLGT
GEDEQYIDALTGMYKETFLLHYNFPPFSVGETGRLGSPGRREIGHGKLAWRAIHPMLPTK
ESFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTENGITALQMDIKIDGITEEIMKIALEQAKDGRIHILNEMA
KALTSARAELSEFSPRIEVINIAVDKIRDVIGSGGKVIREIVEQTGAKINIEDDGTIKIA
SADAKTIEAAKRWIHSIVDEPEVGAIYQGTVVKTADFGAFINFFGSRDGLVHISQLASER
VTKTTDIVKEGDKVWVKLMGFDERGKVRLSMKAVDQKTGKEMTDDKSVKEEKCMDEKKQP
ENKRRRKKKEE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaacgcacaagatagaaattgaatgggccgggcgtccgcttacccttgaaaca
gggaaaatagcgcgtcaagctgatggtgcagtgattgctacctatggagaaacgattgtc
ttagcaaccgttgtatcggccaaaagcccaaaaccagaccaggacttttttccacttacc
gttaattatcaagaaaaatcctatgccgttggtcgaatacctgggggctatttaaaacgt
gaaagtcggccaagtgaaaatgaaactctggtttcacgtttgattgatcggccaattcgt
cctctcttcgttgagggatataaaaatgatacacaagtcattgtttccgttatacagcat
gatctcgaaaataatcccgatatcctcgcgatgattgcttcttctgcggcattgacccta
tcaggtgttcctttcatggggcctatagcgggtgcccgcgttggctattgtaacgggcaa
tatgttctcaatcctcatatggatgaaatgcctgagtcaaaacttgatcttgtggttgct
ggaacagaaagtgctgtattgatggttgaatcagaagcacaagaattgccggaagatatc
atgttgggtgctgtaatgtttggtcataaaggtcttcaacctgtccttgatgccatcatc
aaacttgctgaggttgcggcaaaagatcctcgtgattttgttcctgaagatctttctgac
cttgaaaaagcaatgcaggaaatggccgaacaggatatacgaaaggcttacacaattacc
gataaacaagaacgttatgccgcaattgatgcgctcaaaacagagatcatcaataaattt
atgccagaaacagaagaagactgtcaatttagtacagaccaaattgcaactgtatttaaa
cagttgcaagcaaaaattgttcgcggaaacattcttgatacaaaaaagcgtattgatgga
cgtaatctttctaccgtgcgtcctatccaatcagaagtaagtattttgccccgcacacat
ggatcagcactctttacccgcggagaaacgcaagcgattgtcgttgcgacattgggaact
ggtgaagatgaacaatatattgatgccttaacggggatgtataaggaaacattcctcctc
cattacaattttccaccattttcagtaggtgaaacaggacgccttggttctcctggtcgt
cgtgaaattggacatggaaaattagcatggcgcgcaattcaccccatgttgccaacaaaa
gaatcttttccttataccattcgcgctgtctcagaaattactgaatccaatggttcttct
tctatggcaaccgtttgtggaacttcgcttgctctcatggatgctggtgttccgctcgcg
cgccccgttgcaggtattgccatgggcttgattaaagaaggagaacgctttgctgttctg
tctgatatcttaggagatgaagatcatcttggcgatatggattttaaagttgctggaaca
gaaaatggtattactgctttacaaatggatatcaaaattgacggtattaccgaagaaatt
atgaaaatcgcacttgaacaagccaaggatggacgaattcatatccttaacgaaatggcg
aaagctttaaccagcgcacgagctgaattgagtgaattttctccacgaatcgaagtgata
aatattgctgttgataaaatccgtgatgttatcggctctggtggtaaagttattcgagaa
attgtggaacaaactggagcaaaaattaatattgaagatgatggtactatcaaaattgct
tctgctgatgctaaaaccattgaagcagcaaaacgctggatccattctattgtcgatgaa
cctgaagttggtgctatctaccaaggaacagttgtaaaaactgcagactttggtgcattt
ataaacttctttggttctcgtgatgggctcgttcatatctctcaactagcatcagaacgc
gtcaccaaaacaacagatattgttaaggaaggtgataaagtttgggttaaactcatgggc
tttgatgagcgtggaaaagtgcgtttatcaatgaaggccgttgatcaaaaaaccggaaag
gaaatgaccgatgataaatcggtgaaagaagaaaagtgcatggatgaaaaaaaacaacct
gaaaataagcgccgccggaagaaaaaagaagagtaa
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