Bartonella tribocorum BM1374166: BM1374166_01461
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Entry
BM1374166_01461 CDS
T03233
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
btx
Bartonella tribocorum BM1374166
Pathway
btx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM1374166_01461 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btx03019
]
BM1374166_01461 (rhlE)
Enzymes [BR:
btx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BM1374166_01461 (rhlE)
Messenger RNA biogenesis [BR:
btx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BM1374166_01461 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
CDO49131
LinkDB
All DBs
Position
complement(1627345..1628748)
Genome browser
AA seq
467 aa
AA seq
DB search
MKVVQLRKDFILPIKKEDVFTKLGLPTLLIKNLCIAGMSKPKPIQEQAIPMMLKGHDILG
IAQTGSGKTLAFGLPILSQILALGDKRCPKTARALILAPTRELAVQIDEAIRTMAKGAHL
STCLVFGGVSRLKQIKRMAAGVDVLIATPGRLRDLVREKCVDLSQSRFLILDEADRMLDM
GFIHDVKQIAKLLHQERQTALFSATMPKEIAALAKCLLNDPVKIEVAPQGTTALEITQKL
YCVPTSEKKNVLSKLLTNPAFDSVIVFTRTKHGADAVTLHLAKNGYLVATIHGNKSQGAR
QSALKAFRERSVKILVATDIAARGIDIPGISHVINYDLPDEAESYVHRIGRTGRNGASGE
ALTLFDEKIERTRLRAVERLIRMKLVSDSVPEQFAAFPEKLNALQSGEKENNKERRLKKS
KRQRRFLGRKDDAAQLQRKNSSSPNERHKKAKAAAKRAKCKSVKKAA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagttgttcagctgaggaaagattttattttgcctataaaaaaagaagatgttttt
acaaagttaggtttgcctactcttttgattaaaaatttatgcattgctggaatgagtaaa
cctaagcctatacaagaacaagctattccaatgatgttgaaaggacacgatattttaggg
attgcacagacaggttctggaaaaaccttggcatttggcttacctattttaagtcaaatt
ttagctttgggtgataaacgctgtcctaaaactgcacgtgctttgattttagcgccaacg
cgtgaacttgctgttcagattgatgaagcgattcgcactatggcgaaaggagcacatctt
tcgacgtgtcttgtttttggtggggtatcacgtttaaaacaaatcaaacgtatggcagca
ggtgtggacgtcttgatcgcgactccagggcgtttaagagatcttgttcgtgaaaagtgt
gttgatctttctcaatctcgttttttgattttggatgaagcagatcgtatgttggatatg
gggtttattcatgacgttaagcaaattgcaaagcttttgcatcaagagcgtcagacagcc
cttttttctgcgacaatgccgaaagaaattgctgcgcttgcaaagtgtttactcaatgat
ccagttaagattgaagttgctcctcaaggtactacagctttagagattacccagaaatta
tattgtgttcctaccagtgaaaaaaagaatgttttaagtaaacttttgacaaatccagct
tttgattcggttattgtttttactcgaacgaaacatggggctgatgctgtcacacttcat
ttagcaaagaatggctatttagttgcaacaattcatgggaataaatcacaaggtgctcgc
caatctgctttaaaagcttttcgtgaaagatcggtaaagatccttgttgcaacagatatt
gctgcacgtggtatcgatataccaggaataagccacgttattaattacgacttaccagat
gaagctgaaagttatgtgcatcgtattggtcggacaggacgcaatggggcatctggtgaa
gcacttacgctttttgacgaaaaaattgaaaggacacggttgcgtgctgtagagcgcttg
attcgtatgaaattggtgtctgactctgttccagaacaatttgcagcatttccagaaaag
ctcaatgcgctccaaagtggagaaaaagaaaacaataaagaacgtcgtttaaaaaaatct
aaacgccagagacggtttttaggtcgaaaagatgatgctgcacagttacagcggaagaat
tcttcatctccaaatgagaggcataaaaaggcaaaagcagcggcaaagcgtgcaaagtgc
aagtcagttaaaaaggctgcttaa
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