Bartonella tribocorum BM1374166: BM1374166_01501
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Entry
BM1374166_01501 CDS
T03233
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
btx
Bartonella tribocorum BM1374166
Pathway
btx03420
Nucleotide excision repair
btx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BM1374166_01501 (uvrD)
03430 Mismatch repair
BM1374166_01501 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btx03400
]
BM1374166_01501 (uvrD)
Enzymes [BR:
btx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BM1374166_01501 (uvrD)
DNA repair and recombination proteins [BR:
btx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BM1374166_01501 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BM1374166_01501 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Tudor_1_RapA
DUF3553
Motif
Other DBs
NCBI-ProteinID:
CDO49168
LinkDB
All DBs
Position
1677669..1680032
Genome browser
AA seq
787 aa
AA seq
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MKKRLQKGIMNNFSDHIPFFEEDTPPAHDEENSGFSFPVLKEKKSYNTDYLGQLNPEQQQ
AVINTEGPLLVLAGAGTGKTRVLTTRISHILRSGLASPQQILAVTFTNKAAREMKIRIGE
LIGEVVEGMPWLGTFHSTGAKILRRHAELVDLKRNFTILDSDDVLRLLKQLIQAAGLDDK
RWPARNLAMMIDSWKNQGFSPVHISKSEAHSFGNGMGRELYRSYQNRLKDLNACDFGDLL
LHSISIFQHNPDILREYHSQFRYILVDEYQDTNTAQYLWLRLLAQHPQDQNVNLCCVGDD
DQSIYGWRGAKVENILRFEKDFPSAKIIRLERNYRSTSHILKAASHLIAHNEERLGKVLF
SAQIKSEEEKVKIHSAWDSAEEARAIGEEIERAQQSGHALNHMAILVRASFQMREFEDRF
VTLGLNYRVIGGPRFYERMEIRDAMAYLRVVVHPADDLAFERIINTPKRGIGDATLRILY
ESARARAVSLFSAAADIIETDELKPKARSALRSLIENFRRWQNMLQCTPHRELAEIILDD
SGYTTMWLEDRSPEAPTRLENLKEMIRSIEQFENLQNFLEHVALVMETENNENMDAVNIM
TLHSAKGLEFETVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGLTRAKKHLHIWFV
SNRRVHGLWQSALPSRFLDELPAEHIEVIAMETSYGGYGKSSFQHHDFFYNDYATPRQKR
AQKNKNIEGKIIAQSVSEAPSNFAINDRIFHIKFGYGHITAIDDHKLTIMFEKAGEKRVL
DNFVDKA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagattacaaaaaggtataatgaataatttttccgatcacatacctttcttt
gaagaagatacccccccagcccatgatgaggaaaactcggggttttctttccctgttcta
aaagaaaaaaaatcatataacacagactatttaggacaactcaatccagaacagcaacaa
gctgttataaatactgagggacctcttttagttcttgcaggtgctggtactggaaaaaca
cgcgttttaacaacccgtatttctcacattctgcgctctgggcttgcctctcctcaacaa
atactcgctgtcactttcaccaacaaagcagcccgtgaaatgaaaatacgtattggtgaa
ctcattggtgaagttgttgaagggatgccttggcttggaacttttcattccactggtgct
aaaattttacgccgccacgcagagcttgttgatttaaaaagaaactttacaattctcgat
agtgatgatgttcttcgacttttaaaacagcttattcaagctgcaggcttagacgataaa
cgttggcccgcacgaaatcttgccatgatgattgattcttggaaaaatcaaggtttttca
ccagtacatatctcaaaaagtgaggcgcattcttttggtaacggtatgggacgcgaactt
tatcgcagctatcaaaatcgactaaaagatcttaatgcttgtgattttggcgatcttctg
cttcattctatctctatcttccaacacaatccagatattcttcgcgaatatcattctcaa
tttcgctatattcttgtcgatgaatatcaagatacaaatacagcacaatatctttggctt
cgccttttggcacaacatcctcaagatcaaaatgttaatctttgttgtgttggcgatgat
gatcaatccatttatggatggcgtggtgcaaaagtcgaaaacatattacgatttgaaaaa
gattttccttctgccaaaattattcgtctagaacgcaattatcgctcaacatcccatatt
cttaaagccgcctcccatctgattgcgcataatgaagaacggctgggaaaagttcttttt
tctgctcaaataaagagtgaagaagaaaaagtaaaaattcattcagcatgggattcggca
gaagaagcacgagcaatcggagaagaaatcgaacgcgcccaacaaagcggtcatgcatta
aatcatatggctatattggtacgcgcctcatttcaaatgcgtgaatttgaagatcgcttt
gtaacacttggacttaactatcgcgtcattggtggtccacgtttttatgagcgaatggaa
atacgtgatgccatggcttatttacgcgttgttgtccaccctgctgatgatttagctttt
gagcgtattattaatacacctaaacgcggcataggagacgcaactctgcgcattctttat
gagagtgcgcgcgcacgtgctgtttctcttttttccgctgccgctgatatcattgaaaca
gatgagctcaaacctaaagcacgcagtgctttacgaagccttattgaaaatttccgccgc
tggcaaaatatgctgcaatgtacaccccatagagagcttgccgagatcatccttgacgat
tctggttatacaaccatgtggttagaagatcgctcaccagaagcgcccacacggctagag
aaccttaaagaaatgatccgttccatagaacaatttgaaaatcttcaaaactttttagaa
catgttgcactggttatggaaacggaaaataatgaaaacatggatgccgtcaacatcatg
acacttcattccgctaaagggcttgaatttgaaacagtttttcttccaggctgggaagaa
gggctctttccccaccaacgctcattagatgaaggtggacgctcaggactagaagaagaa
cggcgccttgcttatgtggggcttacaagagcaaaaaaacatctacatatatggttcgta
tccaaccgtagagttcacggactttggcaatctgctcttccctcccgttttctagatgaa
ttaccagcagaacatatagaagtcatagccatggaaacatcttatggtggttatgggaaa
tcctcctttcaacatcatgatttcttttataatgactatgcaacaccaagacaaaagcgt
gcacaaaaaaacaaaaatattgaaggcaaaattatcgctcaatcagtctctgaagcacca
tcaaattttgcaatcaatgatcgaatttttcacataaaatttggttatgggcacattaca
gcgatagacgaccataaattgacaattatgtttgaaaaagctggagaaaagcgtgtactg
gataattttgtagacaaagcttaa
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