Bacillus toyonensis: Btoyo_0102
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Entry
Btoyo_0102 CDS
T02901
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bty
Bacillus toyonensis
Pathway
bty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Btoyo_0102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bty03019
]
Btoyo_0102
03400 DNA repair and recombination proteins [BR:
bty03400
]
Btoyo_0102
Enzymes [BR:
bty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Btoyo_0102
Messenger RNA biogenesis [BR:
bty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Btoyo_0102
DNA repair and recombination proteins [BR:
bty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Btoyo_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_7
HTH_10
GerE
Motif
Other DBs
NCBI-ProteinID:
AHA06110
LinkDB
All DBs
Position
complement(97099..99216)
Genome browser
AA seq
705 aa
AA seq
DB search
MFTKAQELLASYFGYSSFRRGQDETIKNVLEGKDTVCIMPTGGGKSICYQIPALVFEGTT
LVISPLISLMKDQVDTLIQNGISATYINSSISMTEANHRIQLAKQGHYKLLYVAPERLDS
MEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQ
VRDDICKTLEINQENTIMTTFERENLSFSVIKGQDRNAYLADYIRQNQKESGIIYAATRK
VVDQLYEDLMKAEVSVSKYHAGMSDHDRNEQQELFLRDEVSVMIATSAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK
LQNMTDYCHTEQCLQSFILQYFGEEPKEDCGRCGNCTDDRESIDVTRESQMVLSCMIRTN
QRFGKQMIAQVLTGSKNKKVIEFNFHTLPTYGLLSNRSVKEVSDFIEFLISDELIAVEHG
TYPTLKVTGKGKEVLLGNENVLRKERVETRQIVQDHPLFEVLREVRKEIAQGEGVPPFVI
FSDQTLKDMCAKMPRNDSELLTVKGIGEHKLVKYGSHFLQAVQHFIDENPNYVETIKTEV
VSERKKSGKASANSHLETYEMYKQGIDLNEIAKERDLSRQTIENHLIRSFEDGMEVDWQS
FVPKEYESLIETAVQNAEGGLKSIKEQLPNEVSYFMIRAYLQIRK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgtttacaaaagcacaagaacttttagcgtcttatttcggttattcgtcattccgaaga
gggcaagatgaaacaattaaaaatgtattagaggggaaagatacagtttgcattatgcct
acgggcggaggtaagtcaatttgttatcaaattcccgcattagtattcgaaggaacgacg
ttagtaatatcacctttgatttcacttatgaaagaccaagtagatacactaatacaaaac
ggtatatccgctacgtatattaatagttctatttcaatgacagaagctaatcatagaatt
caattagcgaaacaagggcattataagttactttatgtcgctcctgagcgtcttgattca
atggagtttgttgatcaacttatcgatatgaaaatcccgatgattgcgattgatgaggcg
cactgtatttcgcagtggggacatgatttccgtccaagttatttacatatacatcgtata
ctagattatctcccagaaaaaccgctcgtattagcgttaacagcgacagcaactccgcaa
gtacgtgatgatatttgcaaaacgcttgaaattaatcaagaaaatacaattatgacaact
tttgagcgtgagaacttatcattttctgtcattaaaggacaggatcgtaatgcttattta
gcggattatattcgtcaaaatcaaaaggaatcagggattatatatgcagctactagaaaa
gtagttgatcagttgtatgaagatttaatgaaagcggaagtttcggtatcaaaatatcac
gctggtatgagtgatcatgatcgaaatgagcaacaagaactctttttacgagatgaagta
agtgtaatgatagcgacatctgcattcggaatgggtattgataaatcgaatattcgttac
gttattcattatcagctgccaaaaaatatggaaagttactatcaagaagcaggacgtgct
ggtcgtgacggattagatagtgaatgtattttgttatattcttctcaagatgtgcaagta
caacgctttttaattgatcaatcaacaggagaatcacgtttttcgaatgaacttgaaaaa
ttgcaaaatatgactgattactgtcatacagaacaatgtttacaatcattcattttgcaa
tactttggagaagaaccgaaagaagattgtggacgctgcggtaattgtacggatgaccgt
gagagcatcgatgtgacgagagaatcacaaatggttttatcctgtatgattagaacgaac
caacgatttggaaaacaaatgattgcacaagtattaactggatcgaaaaataagaaagtt
attgaatttaattttcatactttaccaacgtatggccttttatcaaaccgtagtgtaaaa
gaagtgagtgactttatagagtttttaatttcagatgagttaattgcagttgaacatggt
acgtatccgacattaaaagtaacgggaaaagggaaagaagtattacttggtaatgagaat
gttctacgaaaagaacgagtagagacgagacaaatcgtccaagatcatcctttatttgaa
gtgttgcgtgaagtacgtaaagaaatcgcacaaggagaaggtgtacctccgttcgttatt
ttctctgaccaaacattaaaagatatgtgtgccaaaatgccgcgaaatgattccgaactg
ttaacagtaaaaggtattggagaacacaaacttgtgaagtatggctcgcacttcttacaa
gcagttcagcattttattgatgaaaatccaaactatgtagaaacaattaagacagaagtt
gtttctgagcgtaaaaaatcaggaaaagcttcagcgaattctcatttggaaacgtatgaa
atgtataaacaaggaattgacctaaatgagattgcaaaagaacgtgatctatcaagacaa
acaattgaaaaccatttaattcgctcttttgaggatgggatggaagtagattggcaaagt
tttgtaccaaaagagtatgaatctcttatagaaactgctgtacaaaatgcagaaggtggt
ttgaaatctattaaagaacagcttccaaatgaagtgagttactttatgatccgtgcttat
ttacaaataagaaagtag
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