Bacillus toyonensis: Btoyo_4123
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Entry
Btoyo_4123 CDS
T02901
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bty
Bacillus toyonensis
Pathway
bty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Btoyo_4123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bty03019
]
Btoyo_4123
03400 DNA repair and recombination proteins [BR:
bty03400
]
Btoyo_4123
Enzymes [BR:
bty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Btoyo_4123
Messenger RNA biogenesis [BR:
bty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Btoyo_4123
DNA repair and recombination proteins [BR:
bty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Btoyo_4123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Cas3-like_C_2
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AHA09994
LinkDB
All DBs
Position
4038671..4040200
Genome browser
AA seq
509 aa
AA seq
DB search
MKLEEYLYKWFGYSEFRQGQKEVITDLLEGKDVIAMLPTGRGKSMCYQLPGLMQGGTVLV
VSPLLSLMEDQVTQLKYVVKNRVIAFNSFRTLSEKREAMKKLAFYKFIFVSPEMLQSDLL
IRELKKIHISMFVVDEAHCISQWGYDFRPDYKKLNVVIENIGSPTVLALTATATKDVLQD
IAESLSLKNVSQHAYSIDRPNIAMEVQFIETIEEKKEALLEHVMYLQGPGIVYCSSRAWT
ERLTEYLRGKGCTGVAFYHGGMEHEERMLIQQQFMNDQLQIVICTSAFGMGVNKSNTRYI
IHFHYPTNIASYLQEIGRAGRDGEPSIAFLLCSPLDHDLPISIIEDELPSKSQIQFLFSL
LQERMFQTKELPIEDVEEICYNAARFNEQYWRFIRYHLERLGIIQRRKLILESLSDEIMN
RLIAEVEIRLRNKYSELENMKSWIQVKGCRREYVLQQFGYRKETELKNCCDYCGITKTEY
KKRRAQQSDFDYNWETELQKLFGLEKMEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaggaatatttatataagtggtttggatattctgaatttcgtcaaggacaa
aaagaagttattacagacttattagaaggaaaagatgttatagcgatgcttccgactgga
agagggaaatctatgtgctatcaactcccagggctaatgcaaggaggaacagtgcttgtt
gtatcaccactattatctttaatggaagatcaagttacacaattaaagtatgttgtgaaa
aatcgagtgattgcatttaatagttttcggacattaagtgaaaaaagagaagcgatgaaa
aaattggctttttataaatttatttttgtgtctccagaaatgttgcaatcggatttatta
ataagagaattgaagaaaattcatatttcaatgtttgttgtggatgaggcccattgtatt
tcgcagtgggggtatgattttagaccggattataaaaaattaaacgtagtaattgagaac
attggatctcctacggtactagcattaacagcgacagcgacaaaggatgtactgcaagat
atagcagagagtttaagtttaaagaatgtctcgcagcatgcatactctattgatcgtcca
aatattgcaatggaagtgcaatttatagagacgatagaagagaagaaagaagcacttttg
gaacatgtgatgtatttacaggggccagggattgtatattgttcaagtagagcatggaca
gaacgtttaacggaatatttaagaggaaaaggctgtactggtgtggctttttatcatggt
ggtatggaacatgaagagcgtatgttaattcagcagcaatttatgaatgaccaattgcaa
attgtaatatgcacaagtgcttttggtatgggagtaaataagtcgaatacgagatatatt
attcatttccattatccgactaatatagcttcctacttacaagaaatcggaagagctgga
agagatggcgaaccgagtatagcctttttattatgtagtccgttggatcacgatttgcca
atttcaattattgaagatgaattgccaagtaagtcgcaaatacaatttttattttcttta
ctacaagaaagaatgtttcaaacgaaagaattaccaatagaagatgtagaagaaatttgt
tataatgcagcaagatttaatgaacaatattggcgtttcatccgctatcatctcgaacgg
cttgggatcatacaacggcgaaaactaatattagagagcttgtcagatgaaatcatgaac
agattaatagctgaagtagaaataagattgcgtaataaatatagtgagctagaaaacatg
aagtcatggatacaagttaaaggatgtaggcgtgaatatgtgcttcaacagttcggttat
agaaaagagacagagttaaaaaattgctgcgattattgtggtattacaaaaacggagtat
aaaaaaagacgagcgcaacaatccgatttcgactataattgggaaacagagttacaaaag
cttttcggcctagagaagatggaggaatga
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