Burkholderia thailandensis H0587: BTL_1272
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Entry
BTL_1272 CDS
T03113
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
btz
Burkholderia thailandensis H0587
Pathway
btz03030
DNA replication
btz03430
Mismatch repair
btz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTL_1272
03430 Mismatch repair
BTL_1272
03440 Homologous recombination
BTL_1272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btz03032
]
BTL_1272
03400 DNA repair and recombination proteins [BR:
btz03400
]
BTL_1272
Enzymes [BR:
btz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTL_1272
DNA replication proteins [BR:
btz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BTL_1272
DNA repair and recombination proteins [BR:
btz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BTL_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHI65010
LinkDB
All DBs
Position
1:1386917..1388056
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AA seq
379 aa
AA seq
DB search
MSASPLIHPAIDTPLAFVDLETTGGSAVEHRITEIGVVVVNANHVSTWTTLVDPQQPIPP
FIQQLTGITDAMVRGAPTFADIAPALLERLDGKLFVAHNASFDRGFLRAEFERAGVAFNP
DVLCTVRLSRALFPRESRHGLDALIERHALVPSARHRALADADLIWQFWQKLHGAIPAEQ
LREQIARTTRRFRLAGALTEAHLESAPAGCGVYALFGDDDAPLYVGRSVRVRQRLRALLT
GERRSAKEMRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRSDRSAAGDAHWPF
VGPVAFEERGESSVFHVVDRWRYVGAASSIEQAATLAADARAAGEGSPDATRAVRRILQT
HLARGLELIPLAGTAPAAA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgccgctgattcatcccgcgatcgatacgccgctcgcgttcgtcgatctc
gaaaccaccggcggctcggccgtcgagcatcgcatcaccgaaatcggcgttgtcgtcgtg
aatgcgaaccacgtgtcgacgtggacgacgctcgtcgacccgcagcagccgattccaccg
ttcatccagcagctcacgggcattaccgacgcgatggtgcgcggcgctccgacgtttgcc
gacatcgcgcccgcgttgctcgagcggctcgacggcaagctcttcgtcgcgcacaacgcg
agcttcgaccgcggcttcctgcgcgctgagttcgagcgcgcgggcgttgcgttcaatccg
gatgtgctttgcacggtgcggctgtcgcgcgcgctgtttccgcgcgagtcgcgtcacggg
ctcgacgcgttgatcgagcggcacgcgctcgtgccgtcggcgcgccaccgggcgctcgcc
gacgcggatctcatctggcagttctggcaaaaattgcacggcgcgataccggccgagcag
ttgcgcgagcaaatcgcgcgcacgacgcgccggttcaggctcgcgggggcgttgacggag
gcgcacctggaaagcgcgcccgccggctgcggcgtctatgcgctgttcggcgacgacgat
gcgccgctctacgtcggccgcagcgtgcgggtccgccagcggttgcgcgcgctgctgacg
ggcgagcgacgctcggcgaaggaaatgcggcttgcccaactggttaggcgcgtcgaatgg
cgcgagacgggtggcgagctcggcgcgctgctggccgaggcggactggatcgcgtcgctc
gcgccatcgttcaaccggcgttcggaccggagcgccgcgggcgatgcgcactggccgttc
gtcgggccggtcgcgttcgaggagcgcggcgagtcgagcgtctttcacgtggtcgatcgc
tggcgctacgtcggcgcggcatcgtcgatcgaacaggcggcgacgctcgcggccgacgcg
cgcgcggcgggcgaaggctcgccggacgcgacgcgcgcggtgcggcgcattttgcagaca
catctcgcgcgcggactcgagctgattccgctcgcgggcacggcgcctgccgccgcgtag
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