Burkholderia thailandensis H0587: BTL_1934
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Entry
BTL_1934 CDS
T03113
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
btz
Burkholderia thailandensis H0587
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btz03009
]
BTL_1934 (rimO)
Enzymes [BR:
btz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BTL_1934 (rimO)
Ribosome biogenesis [BR:
btz03009
]
Prokaryotic type
ribosomal protein modification factors
BTL_1934 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
S1CSD-TOTE-1
DUF2249
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AHI63071
LinkDB
All DBs
Position
1:2140410..2141747
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AA seq
445 aa
AA seq
DB search
MVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEAL
AENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHAVGEVMQVVHSHLPKPHDPFVD
LVPAAGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVAEVMLEAENLFKAGVK
ELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELAAQYGAWVRLHYVYPYPH
VDEIIPMMAQGPLKGHVLPYLDVPFQHAHPDVLKRMKRPANAEKVLERVQKWREICPDLT
IRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEGASANELDGALPDDVREAR
RARFMEVAEEVSAARIERKVGKTLKVLIDEVNEEGGIGRTAADAPEIDGVVYVEPAAKAS
KRYKVGDFVSVKITGADGHDLWGEV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtttccctcgggtgcccgaaggcgctcgtcgattccgagcagatcatcacgcagttg
cgcgcggaaggctacgaaatctccggcacctatgacggcgcggatctcgtcgtcgtcaac
acctgcggcttcatcgacgaagcggtgcaggaaagcctcgatgcgatcggcgaggcgctc
gccgaaaacggcaaggtgatcgtcaccggctgcctcggcgcgaagaagagcgcgagcggc
tccgggctcatcgaggaagtccacccgaaggtgctcgccgtcaccggcccgcacgcggtc
ggagaagtgatgcaggtcgtgcacagccatctgcccaagccgcacgatccgttcgtcgat
ctcgtgccggccgcgggcatcaagctcacgccgcgtcactacgcgtatctgaagatctcc
gaaggctgcaatcaccgctgctcgttctgcatcattccgtcgatgcgcggcgatctcgtg
tcgcggcccgtcgccgaggtgatgctcgaagccgagaacctgttcaaggccggcgtgaag
gaactgctcgtgatctcgcaggacacgagcgcgtacggcgtcgacgtcaagtaccgcacg
ggcttctggaacggcaggccgctcaagacgcgaatgaccgagctcgtcggcgcgctcggc
gagctcgccgcgcagtacggcgcatgggtgcgtctgcattacgtgtatccgtatccgcac
gtcgacgagatcatcccgatgatggcgcaaggcccgctcaagggccatgtgctgccgtat
ctcgacgtgccgttccagcatgcgcatcctgacgtgctcaagcgaatgaagcgcccggcg
aacgcggagaaggtgctcgagcgcgtgcagaagtggcgcgagatctgtccggatctgacg
attcgcagcacgttcatcgcgggctttccgggcgagaccgaagcgcaattcgagacactc
ctcgacttcattcgcgaggccgagctcgatcgcgtcggctgcttcgcgtattctccggtc
gagggcgcgagcgcgaacgagctcgacggcgcgctgcccgacgacgtgcgcgaggcgcgc
cgcgcgcgcttcatggaagtcgccgaggaagtgtcggccgcgcgcatcgagcgcaaggtc
ggcaagacgctcaaggtgctgatcgacgaggtcaacgaagaaggcggcatcggccgcacc
gcggccgatgcgccggagatcgacggcgtggtctacgtggagccggcggcgaaggcgtcc
aagcgctacaaggtcggcgatttcgtatccgtgaagatcacgggcgccgacggccacgat
ctgtggggcgaggtctga
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