Burkholderia thailandensis H0587: BTL_2208
Help
Entry
BTL_2208 CDS
T03113
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
btz
Burkholderia thailandensis H0587
Pathway
btz02024
Quorum sensing
btz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTL_2208 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTL_2208 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btz03019
]
BTL_2208 (hfq)
03036 Chromosome and associated proteins [BR:
btz03036
]
BTL_2208 (hfq)
Messenger RNA biogenesis [BR:
btz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BTL_2208 (hfq)
Chromosome and associated proteins [BR:
btz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BTL_2208 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Mucin-like
LSM
Motif
Other DBs
NCBI-ProteinID:
AHI65098
LinkDB
All DBs
Position
1:2492484..2493143
Genome browser
AA seq
219 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRTGGGGRPGGREGGGHGPYGSHGGPRESRGEGGGYGARESR
GDGGYGSREPRGDGGYGSREPRGDGGYGSREPRGDGGGYGSRESRGDGGYGTREPREPRE
SYGAPQEGASTPSGTQDRNSNGPVIVTRRRRSLGPTDGQ
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgcctgacgggatgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcctgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcacgtccgggcggccgcggcccgcgc
acgggcggcggcggtcgtcccggcggacgcgaaggcggcggtcacggtccgtacggctcg
cacggcggcccccgcgagtcgcggggtgaaggcggcggctatggcgcccgcgaatcccgt
ggcgacggcggttacggctcccgcgaaccccgtggcgacggcggttatggctcccgcgag
ccccgtggcgacggtggttatggctcccgcgagccccgtggcgacggtggcggttacggc
tcccgcgaatcccgtggcgacggcggatatggcacgcgtgaaccgcgcgagccccgcgag
tcttacggcgcgccgcaagaaggcgcatcgacgccgtccggcacgcaagatcgcaacagc
aacggccccgtgatcgtcacgcgccgccgccgttcgctcggcccgaccgacggtcaataa
DBGET
integrated database retrieval system