Burkholderia thailandensis H0587: BTL_3094
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Entry
BTL_3094 CDS
T03113
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
btz
Burkholderia thailandensis H0587
Pathway
btz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTL_3094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btz03019
]
BTL_3094
Enzymes [BR:
btz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTL_3094
Messenger RNA biogenesis [BR:
btz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTL_3094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Ric8
DegT_DnrJ_EryC1
CMS1
CARD_2
P-loop_SecA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AHI66080
LinkDB
All DBs
Position
1:3499730..3501181
Genome browser
AA seq
483 aa
AA seq
DB search
MSFASLGLAEPLVRAVNELGYTQPTPIQAQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHAFYAENRGARRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSSLDILVLDEADRMLDMGFIHDIKRVLAKLPA
KRQNLLFSATFSDEIKSLADSLLDSPALIEVARRNTTAETIAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALSEFKNCTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKQLLRD
IERLIKREISQEVIPGFEPDPNAKPEPIQRRGQRGGNGGGANGGNGGGSAGNAGRGNRAP
RAASQPQAQQGQPAARRDGGTQAKAAKPQQARGGGRPAGNGASNGGGAHANRNRSSRSGQ
RGR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgcatctctcggtctcgccgaaccgctcgtgcgggccgtcaacgagctgggc
tatacgcagcccacgccaatccaggctcaggccattcccgccgtactgggcggcggcgat
cttctcgccggcgcgcagacgggcaccggcaagaccgccggcttcacgctgccgatcctg
caacgcctgcacgcgttctacgcggaaaaccgcggcgcgcgccgcgcggtgcgcgcgctc
atcctcacgccgacgcgcgagctcgccgcgcaagtcgaggaaagcgtgcgcgcgtacagc
aagtacgtgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gacgcgttgaagcgcggcgtcgacatcgtcgtcgcgacgccggggcgcctgctcgatcac
atgcagcagaagacgatcgacgtttcgagcctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcattcacgacatcaagcgcgtgctcgcgaagctgccggcg
aagcgccagaacctgctgttctcggccaccttctccgacgagatcaagtcgctcgcggac
agcctgctcgattcgcccgcgctgatcgaggtcgcgcgccgcaacacgacggccgagacg
atcgcgcagaagatccacccggtcgatcgcgatcgcaagcgcgagctgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtgttcacgcgcacgaagcacggcgcgaac
cggctggccgagcaactgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcgcgcacgcgcgcgctgtccgagttcaagaactgcacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcgggatcgatatcgatcaattgccgcacgtcgtgaac
ttcgatctgccgaacgtccccgaggactacgtgcaccgaatcggccgcaccggccgcgcg
ggcgcgaacggcgaggcggtgtcgctcgtgtgcgtcgacgaaaagcagttgctgcgcgac
atcgaacggctcatcaagcgcgagatttcgcaggaagtgatcccgggcttcgagccggac
ccgaacgcgaagccggagccgatccagcggcgcgggcagcgcggcggtaacggcggcggc
gctaacggcggtaacggcggcggtagcgcaggaaacgccggccgcggcaatcgcgcaccg
cgcgcggcgagccagccgcaggcgcagcagggtcagcccgccgcgcggcgagacggcggc
acgcaggcaaaggccgccaagccgcagcaggcacgcggcggcggacggccggcgggcaat
ggggcttcgaacggcggcggcgcgcatgcgaaccgcaaccgttcgtcgcgcagcggccag
cgcggccgctga
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