Burkholderia thailandensis H0587: BTL_3239
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Entry
BTL_3239 CDS
T03113
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
btz
Burkholderia thailandensis H0587
Pathway
btz02020
Two-component system
btz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BTL_3239 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BTL_3239 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btz03021
]
BTL_3239 (rpoN)
Transcription machinery [BR:
btz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BTL_3239 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF2344
HTH_IclR
HTH_38
HTH_23
DUF5805
Motif
Other DBs
NCBI-ProteinID:
AHI64552
LinkDB
All DBs
Position
1:3687150..3688658
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AA seq
502 aa
AA seq
DB search
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVATAIAQNPLLENDDDWIASPLRV
AADGSVIAQTPASSSPEPMSGASNGTTATNERTERDETAGVDEYDSYSADGGDASQWNLD
DFGRSPAASDDDDLPPMQIHETSTSLRDHLMAQLRVTQASPRDRALVTFLIESLDDDGYL
SASLDEVLADLPAELEVDVDELNAALALVHSFDPAGVGARSASECLKLQLLRLDPSPTRT
LALDIVSQHLELLAARDFTRLRKQLKATDDELRDAHALIRSLEPFPGAAYGKAEADYVVP
DIIVKKAGQSWQAELNPEVVPKLRINHLYANILRNSRGDPSAGSLKQQLQEARWLIKNIQ
QRFETILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPF
GTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVA
RRTVAKYREALKIPAVNLRKSL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagtctccaacttcgcctgtcgcagcatctcgcgctcacgccccagcttcag
caatcgatccggctgctgcagttgtcgacgctcgaactgcagcaggaagtcgcaacggcg
atcgcgcagaacccgctgctcgagaacgacgacgactggatcgcgagccccctgcgcgtc
gcggccgacggctcggtgatcgcgcagacgcccgcgtcgtcctcgcccgagccgatgtcc
ggcgcgtcgaacggcacgactgcgacgaatgagcgcaccgagcgcgacgaaaccgccggc
gtcgacgaatacgacagctattcggccgacggcggcgacgcgagccagtggaatctcgac
gacttcggccgctcccccgccgcatccgacgacgacgatctgccgccgatgcagatccac
gaaacctcgacgtcgctgcgcgatcatctgatggcgcagttgcgcgtcacgcaggcgagc
ccgcgcgatcgcgcgctcgtcacgttcctgatcgaatcgctcgacgacgacggctacctg
agcgcgtcgctcgacgaagtgctcgccgatctgccggcggagctcgaagtcgacgtcgac
gaactgaacgcggcgctcgcgctcgtgcacagcttcgatccggcgggcgtcggcgcgcgg
tccgcgtccgaatgcctgaagctgcaactgctgcggctggatccgtccccgacgcgcacg
ctcgcgctcgatatcgtatcgcagcatctcgagctgcttgccgcgcgcgatttcacgcgc
ctgcgcaagcaactgaaggcgaccgacgacgagctgcgcgacgcgcacgcgctgatccgc
tcgctcgagccgtttcccggcgcggcgtacggcaaggccgaagccgattacgtggtgccc
gacatcatcgtgaagaaggccggccagagctggcaggcggaactcaatccggaagtggtg
ccgaagctgcgtatcaaccatctttacgcgaacatcctgcgcaacagccggggcgatccg
agcgcgggatcgctgaagcagcagcttcaggaagcgcgctggctgatcaagaatattcag
cagcggttcgagacgatcctgcgggtcgcgcaggcgattgtcgaacgtcagaagaatttc
ttcgcgcacggcgaaattgcgatgcgccccttggttttgcgggaaatagctgatacgctg
ggcctacacgagtcgactgtctcccgtgtgacaaccggcaagtacatgctgactccgttc
ggcacacttgaatttaagtacttcttcggatcgcacgtatcgacagacaccggaggtgcc
gcgtcgtcgacagcgatccgcgccctcatcaaacaactgataggagccgaagaccccaaa
tcccctctttcggacagtcgcatagccgagctgctagcggaacaagggttcgtggtcgcg
cgccgcacggttgccaaatatcgcgaggccctcaagatcccggcggtgaatctgcgcaag
tctctgtag
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