Burkholderia thailandensis H0587: BTL_3380
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Entry
BTL_3380 CDS
T03113
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
btz
Burkholderia thailandensis H0587
Pathway
btz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BTL_3380 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btz03021
]
BTL_3380 (rpoD)
Transcription machinery [BR:
btz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BTL_3380 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
Motif
Other DBs
NCBI-ProteinID:
AHI67897
LinkDB
All DBs
Position
2:13020..15062
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AA seq
680 aa
AA seq
DB search
MTKKLNEVSVDDDANQSDEQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEELE
ERRTKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAE
TLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEI
AKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLIDPNAADTDGFSEK
DAEEIENEDEEAEEDDEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMRRA
FEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVDK
CGMPRSEFIARFPGSETDLDWAEKVAAEGHSYGAILSRNIPAIREQQQRLLDLQARVVLP
LKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQET
GLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPADA
ALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKA
LRKLRHPSRSDKLKSFLEGN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaaccagagcgacgaacag
cctaccgctgcgtcgggcaaaggcgaaaaggccaaggcgcgcgatcgccgcgccaaggaa
aaggcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaa
gagcgccgtacgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacg
tacgccgaaatcaacgaccatctgccggacaacttcacggaaacggaagcgctcgaaggc
atcatcggcacgttcaacgacatgggcgtcgcggtgtacgagcaggcgcccgacgccgag
acgctgctgttgaacgacaacgcgcccgccgcgtcgtccgacgatgaagtcgaagaggaa
gcggaagtcgcgctgtcgaccgtcgattccgaattcggccgcacgaccgatccggtccgg
atgtacatgcgcgagatgggcacggtcgagctgctcacgcgcgagggcgaaatcgagatc
gcgaagcggatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccgacg
acgatcgccgacatcctcgcgatggccgagcgcgtcgcgaacgaggaaattcgcgtcgac
gagctcgtcgacggcctgatcgatccgaacgccgccgataccgacggcttctcggagaag
gacgccgaggaaatcgagaacgaggacgaggaagccgaagaggacgacgaagaggaagaa
gaggacgacgacggcgccgcgcaggcgaccgccaatgcggctcagctcgaagcgctgaag
cgcgcgtcgctcgagaagttcgcgctgatcagcgaatggttcgacaagatgcgccgcgcg
ttcgagaaggaaggctacaagtcgaagtcgtacctgaaggcgcaggaaacgatccagaac
gagctgatgtcgatccgcttcaccgcgcgcaccgtcgagcgtctgtgcgacacgttgcgc
gcgcaggtcgacgaagtgcgtcaggtcgagcgtcagattctgcacatcgtcgtcgacaag
tgcgggatgccgcgctcggaattcatcgcgcgcttcccgggcagcgagaccgatctcgac
tgggcagagaaggtcgcggccgaaggccattcgtacggcgcgatcctgtcgcgcaacatc
ccggcgatccgcgagcagcagcagcgtctgctcgacttgcaggcgcgcgtcgtgctgccg
ctgaaggacctgaaggaaaccaaccgccagatggcggcgggcgaactgaaggcgcgccag
gcgaagcgtgaaatgaccgaggcgaacctgcgtctcgtgatctcgatcgcgaagaagtac
acgaaccgtggcctgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaag
gcggtggacaagttcgaataccgtcgtggctacaaattctcgacctacgcgacgtggtgg
attcgtcaggccatcacgcgctcgatcgcggaccaggcgcgcacgatccgtattccggtt
cacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagatcctgcaggaaacc
ggcctcgagccggacccggctacgcttgccgagaagatggagatgccggaagacaagatc
cgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggcgacgac
gacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccggcggatgcc
gcgctgcatgcgagcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacgccgcgt
gaggcgaaggtgctgcggatgcgctttggtatcgaaatgagcaccgatcacacgctcgag
gaagtcggcaagcagttcgacgtcacccgcgagcggattcgtcagatcgaggcgaaggcg
ctgcgcaagctgcgtcatcctagccgttcggacaagctgaagtcgttcctcgaggggaac
tga
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integrated database retrieval system
