Burkholderia thailandensis H0587: BTL_4048
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Entry
BTL_4048 CDS
T03113
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
btz
Burkholderia thailandensis H0587
Brite
KEGG Orthology (KO) [BR:
btz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
btz03016
]
BTL_4048
Enzymes [BR:
btz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BTL_4048
Transfer RNA biogenesis [BR:
btz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BTL_4048
Prokaryotic type
tRNA splicing ligases
BTL_4048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AHI67227
LinkDB
All DBs
Position
2:855319..856752
Genome browser
AA seq
477 aa
AA seq
DB search
MDLTRLTRHGEFEWHIPATGAMRVPGVIYADRKLIADMDDKVYEQVCNVAMLPGIVGASY
AMPDAHWGYGFPIGGVAAFDAHAGGVISAGGVGFDISCGVRTLHTGLVRDDIDAVKKTLA
DALFAHIPAGVGSTGRLRLSAAKTDDMLTGGAVWAVEQGYGTPSDLERIEEGGMVRHAKP
SMVSALAKRRQRDELGTLGSGNHYLEVQEIEDIYDPACAQRYGLQRGQVVVTIHCGSRGL
GHQIGTEFLKDMVIAAKSYGIALPDRELACAPILSDLGERYLGAMRAAINCALANRQVLT
HLTREVFAKVLPAAQLTLFYDVSHNTCKVEDHVIDGRRRQLYVHRKGATRAFGPGHPALP
DALRDAGQPVLIGGSMGTASYVLAGANAPGGERAFGSACHGAGRAMSRFAASRRWRGRAL
VDELAARGIVIRSLSDRGIAEEAPGAYKDVGAVVDAAAEAGLARKVARLAPLVCIKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatttgacccgactgacgcggcacggcgaattcgagtggcacatccccgcgacgggc
gcgatgcgcgtgccgggcgtcatttatgcggaccgcaagctgatcgccgacatggacgac
aaggtctacgagcaggtttgcaacgttgcaatgctgccgggcatcgtcggcgcgtcgtac
gcgatgccggacgcgcactggggatacggttttccgatcggcggcgtcgcggcgttcgac
gcgcacgcgggcggcgtgatctcggcgggcggcgtcggcttcgacatctcgtgcggcgtg
cgcacgctgcacacgggactcgtgcgggacgacatcgacgcggtgaagaaaacgctcgcc
gacgcgctgttcgcgcacattccggccggcgtcggcagcaccgggcggcttcggctgtcg
gccgcgaaaacggacgacatgctcacgggcggcgccgtgtgggccgtcgagcagggttac
gggacgccgagcgatctcgagcgcatcgaagagggcgggatggtgcggcatgcgaagccg
tcgatggtgtcggcgctcgcgaaacggcgccagcgcgacgagctgggcacgctcggctcc
ggcaatcactatctcgaagtgcaggagatcgaggacatctacgatcccgcatgcgcgcaa
cgctacgggctgcagcgcgggcaggtcgtcgtgacgatccactgcggctcgcgcgggctg
ggccatcagatcggcaccgagtttctgaaggacatggtgatcgccgcaaaaagctacggg
atcgcgctgcccgatcgcgagctcgcgtgcgcgcccattctgtcggacctcggcgagcgc
tacctgggcgcgatgcgcgcggcgatcaactgcgcgctcgcgaaccggcaggtcctcacg
catctgacccgcgaagtcttcgcgaaggtattgccggccgcgcagctgaccctgttttac
gacgtgtcgcacaacacgtgcaaggtcgaggatcacgtgatcgacggccgccgcaggcag
ctctacgtgcaccgcaagggcgccacgcgcgcgttcgggcccggacatccggcgctgccc
gatgcgctgcgcgacgcgggccagccggtgctgatcggcggtagcatgggaacggcgtcg
tacgtcctggcgggggcgaacgccccgggcggcgagcgcgccttcggctcggcgtgccac
ggcgcgggccgcgcgatgagccgcttcgcggcctcccggcgctggcgcggccgggcgctc
gtcgacgagctcgcggcccgcggcatcgtgatccgcagcctgtcggaccgcggcatcgcc
gaagaggcgccgggcgcttacaaggacgtcggcgcggtcgtcgacgccgcggccgaggcc
gggctcgcgcgcaaggtcgcgcggctcgcgccgcttgtctgcatcaagggttga
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integrated database retrieval system
